Bacteroides ovatus: Bovatus_04599
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Entry
Bovatus_04599 CDS
T04113
Symbol
rpoE_8
Name
(GenBank) ECF RNA polymerase sigma-E factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
boa
Bacteroides ovatus
Pathway
boa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bovatus_04599 (rpoE_8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boa03021
]
Bovatus_04599 (rpoE_8)
Transcription machinery [BR:
boa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bovatus_04599 (rpoE_8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
HTH_30
HTH_Tnp_ISL3
HTH_10
HTH_28
GerE
HTH_AsnC-type
HTH_23
HTH_24
HTH_38
PhyR_sigma-like
Xre-like-HTH
DUF2774
HTH_20
CDI_Immunity_Comp
HTH_8
HTH_40
HTH_11
HTH_17
TnsD
HTH_Mga
Toxin_YhaV
MerR
DUF134
HTH_7
HTH_Crp_2
HTH_5
Pribosyltran_N
DUF3095
Motif
Other DBs
NCBI-ProteinID:
ALJ49190
LinkDB
All DBs
Position
complement(5986930..5987505)
Genome browser
AA seq
191 aa
AA seq
DB search
MKEVHLSESNFLLSAIQRGDQKAFDALFRRYYPALCAYGHRFVDLEDAEEIVQDSLLWIW
ENRENLFIETSLSSYLFKMIYRKALNKLAHIDATQRADTRFYEEMQEMLQDTDLYQVEEL
TQRIKDAIATLPESYREAFVMHRFRDMSYKEIAEILGVSPKTVDYRIQQALKQLRVDLKD
YLPLLLPILFP
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagttcacctgtcagaaagcaatttcctattatctgctatacagcgaggcgac
caaaaagcatttgatgcactgtttcggaggtattatccggcactgtgtgcctacggccat
cgcttcgtcgatctggaagatgcggaagaaattgtgcaggattctcttttatggatttgg
gagaacagagaaaatttgtttatcgaaacctcgcttagttcgtacctctttaaaatgata
taccgcaaagctctgaacaagcttgcacatattgacgccactcaacgtgccgacactcga
ttttatgaagaaatgcaggagatgctacaagatacggatctttatcaagtcgaagagttg
acacaacgcatcaaggatgccattgccacattgccggaaagttaccgggaagctttcgtg
atgcatcggttccgggatatgagttataaagaaatagcggaaattctgggagtatctccc
aaaactgtagattaccgcattcagcaggcattaaagcaactacgcgtagatttaaaggat
tatctgcctttattgctaccaattctatttccttaa
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