Bacteroides ovatus: Bovatus_04666
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Entry
Bovatus_04666 CDS
T04113
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
boa
Bacteroides ovatus
Pathway
boa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bovatus_04666 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boa03019
]
Bovatus_04666 (rny)
Messenger RNA biogenesis [BR:
boa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bovatus_04666 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ALJ49256
UniProt:
A0A3A9HBB8
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All DBs
Position
complement(6074214..6075749)
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AA seq
511 aa
AA seq
DB search
MIAIIATAIACFIVGGILSYILFRYVLKSKYDNVLKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQREMVLSQRQEEIQRKKMEAEAVKENLEAQLVIVDKK
KDELDKLQQQEIDKLEAISGLSAEEAKERLVESLKEEAKTQAQSFINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaataatagcaacagcaattgcttgcttcatcgtaggaggaatcctttcatat
atactattccggtatgtactgaaatccaaatacgataatgtcctgaaagaagcagagaca
gaagcggaagtaattaagaaaaacaagctgctggaagtgaaggagaaattcctgaataaa
aaagcagatcttgaaaaagaggtagcattgcggaatcagaagattcagcaagcggaaaac
aaactgaaacaacgcgaaatggttcttagccagcgtcaggaagaaatccaacgcaaaaag
atggaagccgaagcggtaaaagagaacctggaagcgcaacttgtcattgttgataagaaa
aaagatgaactcgataaactgcaacagcaggaaatcgataaactggaagcaatctccgga
ttgtctgccgaagaggccaaagaacgcctggtagaatcactgaaagaagaagctaaaacg
caggcacaatcattcattaatgacattatggatgatgctaagttaactgccagcaaagaa
gcgaaacgtatcgttatccagtctatccaacgggtagctacggaaactgccatcgaaaac
tctgttacggtattccatattgaatcagatgaaatcaaaggacgtattatcggacgtgaa
ggacgtaacatccgtgctttggaagctgctaccggcgttgaaatcgttgttgacgacact
ccggaagctatcgttctttctgccttcgacccggttcgccgtgaaattgcccgtttggca
ctgcatcagcttgtgaccgacggacgtatccatccggctcgtatcgaggaagtggtggct
aaagttcgcaaacaggtggaagaagaaattatcgaaaccggtaaacgtacaaccatcgac
ttgggtatccacggtctgcatcctgaattgatccgtatcatcggtaagatgaaatatcgt
tcttcttatggtcagaacttgttgcagcatgcacgtgaaacagccaatctttgtgctgtg
atggcatctgaactgggattgaacccgaagaaagcgaaacgtgcaggtttgctgcatgat
atcggtaaagtgcctgatgaagaaccggaattgccgcacgcattgctgggtatgaaactt
gccgagaagtacaaagaaaaaccggatatttgcaacgctatcggtgctcaccacgacgaa
acggaaatgaccagcttgctggctcctatcgtacaggtatgtgacgccatctccggtgca
cgtccgggtgcacgccgcgaaatcgtagaggcttacatcaagcgtctgaacgatctcgaa
caactggctatggcttatccgggtgtaacaaagacttatgctatccaggcagggcgcgaa
ctccgcgttatcgttggtgcggataagattgacgacaagcagacagaaagcctgtcaggc
gaaatcgctaagaagatccaggatgaaatgacttatccgggacaagtgaagattaccgtc
attcgtgaaacacgtgcggttagtttcgctaaataa
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