Bombella sp. ESL0368: GN304_00015
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Entry
GN304_00015 CDS
T06372
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bob
Bombella sp. ESL0368
Pathway
bob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GN304_00015 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bob03021
]
GN304_00015 (rho)
03019 Messenger RNA biogenesis [BR:
bob03019
]
GN304_00015 (rho)
Transcription machinery [BR:
bob03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GN304_00015 (rho)
Messenger RNA biogenesis [BR:
bob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GN304_00015 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
NACHT
Fungal_virus_P2_C
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QGT74343
LinkDB
All DBs
Position
complement(2773..4083)
Genome browser
AA seq
436 aa
AA seq
DB search
MHLAELKKKSPADLLAFAEELEVENASSLRKQDMMFAILKTLAEREQAIYGEGTLEILPD
GFGFLRSPEANYLPGPDDIYVSPAQVRRFALRPGDTVEGEIRAPRDGERYFALQKVNTIN
FEAPEQVRARINFDNLTPLFPERRLRMETEPTGEAGAAPAPAKGKGRDRKDQKDYTSRVI
DLVSPIGMGQRALIVAPPRTGKTVMLQSIAASISANHPDVFLIVLLIDERPEEVTDMARS
VRGEVVSSTFDEPAHRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSG
KVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSE
LMLDRKLADKRTFPAIDITKSGTRKEELLVDRASLSKMWVLRRILAPMGTMDAMDFLLDK
LRYSKTNQDFFDAMNN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgccgaactgaagaagaaatcccctgctgatctgctggcttttgctgaagag
ctggaggtcgaaaatgcatcatccctgcgcaagcaggacatgatgtttgccatcctcaag
actctcgccgagcgtgagcaggccatttatggcgaaggaacgctcgagatcctgccggat
ggtttcggctttctgcgcagcccggaagccaattatctgcccggcccggatgatatctat
gtgtctccggcccaggtgcgccgctttgccctgcggcctggtgatacggtggagggtgag
atccgggcgccccgggatggagagcgctattttgccctccagaaggtcaataccatcaat
tttgaggcaccggagcaggtccgtgcccgtatcaatttcgacaacctgacccccctcttc
cccgagcgccgtctccgcatggaaaccgagccgacaggggaagctggcgctgctccggct
cctgccaagggcaaggggcgtgatcgcaaggaccagaaggattacacctcccgtgtgatt
gatctggtctctcccatcggcatggggcagcgtgccctgatcgttgcaccgccgagaacg
ggtaagacggtgatgcttcagagcattgctgcttccatttctgccaatcacccggatgtg
ttccttatcgttctgctgattgatgaacggcctgaggaagtgacggacatggcccgatcc
gttcgtggtgaggtcgtttcttccacctttgatgaaccggcccaccgccatgtgcaggtg
acggaaatggtgctggaaaaggcgaaacgccttgtcgagcacaagcgtgatgtggtcatc
ctgctggattccattacccgtctggcccgggcctataacacggtcgttccctcatccggc
aaggtgctgaccggtggtgtggatgccaacgccctccagcggccgaagcgtttcttcggt
gcggcccgtaacatcgaggaaggtggctcgctgaccatcattgccacggccctgattgat
acaggttcccgcatggatgaggtcatctttgaagagttcaagggcacgggcaactccgag
ctgatgctggaccgcaagctggcagacaagcgcaccttcccggccatcgacatcaccaag
tccggcacccgcaaggaagagctgctggtggaccgggcgtccctctccaagatgtgggtc
ctgcgccgtatccttgccccgatgggcacgatggatgccatggacttcctgctggacaag
ctgcgttacagcaagaccaatcaggacttcttcgatgcgatgaacaactga
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