Bombella sp. ESL0368: GN304_00270
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Entry
GN304_00270 CDS
T06372
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bob
Bombella sp. ESL0368
Pathway
bob00541
Biosynthesis of various nucleotide sugars
bob01100
Metabolic pathways
bob01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GN304_00270 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bob01005
]
GN304_00270 (rfaD)
Enzymes [BR:
bob01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GN304_00270 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bob01005
]
Core region
GN304_00270 (rfaD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QGT74388
LinkDB
All DBs
Position
52163..53143
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AA seq
326 aa
AA seq
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MIIVTGGAGFIGSCVQQALFRQGRRTVIVDYLHDQGKWHNLASHPPHQIIPPHELSAFLA
TVRGVEAVIHLGAISETTARDGDLVWQSNVTLSQQLWRWCVEHEVPFLYASSAATYGAAD
RPELFADGLDSIEGLQPLNLYGWSKQAFDLWVKRTVEAGEPTPPQWAGLKFFNVYGPNEY
HKGRMISVIKVKYDELMAGNPIRLFQSDRTDIADGQQKRDFIWIGDVVNVLLWLLEHPAV
SGLFNCGTGQACTYEALARAVCAAAGRAAEIDYVPMPESLRGQYQSFTQADMRALRAAGY
TAPFTTPEDGISHYIKGYLASGRPYL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcaccggcggagccggatttattggttcatgcgtgcagcaggccctgttc
cggcaggggcggcggactgtcattgtggattatctgcatgatcaggggaagtggcacaat
cttgccagccatcctccccaccagatcattcccccccatgaactttccgcttttctggca
acggtgagaggggtggaggccgtcatccacctgggggccatcagtgaaacgacggcccgg
gatggagacctggtctggcagagcaatgtcaccctgtcccagcagctctggcggtggtgt
gtggagcatgaggtgccgttcctttatgcttcttcggcagcaacctatggggcggcagac
cggccagagctgtttgcagacgggttggacagcatcgagggattgcagccgctcaatctt
tatggctggtccaaacaggcgttcgacctctgggtgaagcggacggtagaggctggggaa
ccgaccccaccacaatgggccggtctgaagttcttcaatgtttatggccctaatgagtat
cacaaggggcggatgatttcggtcatcaaggtaaaatatgatgagttgatggccggtaat
cccatccgtctgttccagtccgaccggacggatattgcggatgggcagcagaagcgtgat
ttcatctggatcggggacgtggtgaatgtcctgctctggctgttggaacaccctgccgtc
agcgggctgttcaattgcgggacaggacaggcctgtacatacgaggctctggcccgggct
gtctgtgctgcggcgggacgggcagcagagatcgattatgttccgatgccagagagcctg
agggggcagtaccagtccttcacgcaggctgacatgagggcactgcgggcggctggatat
acggctcctttcacaacaccggaggacgggatcagccattacatcaaggggtatctggca
tcaggaaggccgtatctgtga
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