Bombella sp. ESL0368: GN304_04470
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Entry
GN304_04470 CDS
T06372
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bob
Bombella sp. ESL0368
Pathway
bob03420
Nucleotide excision repair
bob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GN304_04470
03430 Mismatch repair
GN304_04470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bob03400
]
GN304_04470
Enzymes [BR:
bob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GN304_04470
DNA repair and recombination proteins [BR:
bob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GN304_04470
MMR (mismatch excision repair)
Other MMR factors
GN304_04470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
AAA_22
ProSAAS
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QGT75071
LinkDB
All DBs
Position
complement(1018172..1020385)
Genome browser
AA seq
737 aa
AA seq
DB search
MDDLFSPRFPSSGPDYLHGLNEEQRLAVETTQGPLLILAGAGTGKTRVLTTRFAHILLEK
LAWPEQILAVTFTNKAAREMRERISAILGRPVEGLWLGTFHSLCARMLRQHAPHVGLERN
FTILDTDDQLRLLKQVIEPWKLDLKRSPPAQIMHQIQLWKDQALLPDGITAAQTPELANG
QLPAIYAAYQIRLKEMNACDFGDLMLHVVTILRQHPDVLEQYQKRFRYILVDEYQDTNTI
QYLWLRLLARRQDGQPSNIACVGDDDQSIYSWRGADIANILRFEKDFPGARIIRLEQNYR
STPRILTVASQVIAHNEGRLGKVLRPGLDIMEGDPVEVINMPDSDDEARVIGRRIQEFHT
KGHPYGSIAILMRAGFQTRPFEDALMKMGIPYQIIGGLRFYERAEIRDAIAYMRAVLYPV
DDLAFERIVNLPKRGFGSVALTRLRNAARERGLSLQQTLQHQLEQGQLKGKAAATLSDLM
DSLSRARDTVSKEGHVVATDMVLEESGYLAMWRDDPKTIEAAGRLDNIRELIRAIGEFPT
MDAFLEHIALVMDSDNAEDDPDKVSLMTLHAAKGLEFPTVFLPGWEEGLFPSQRSLDEGG
NQALEEERRLAYVGLTRARERVIISHANSRRLYANWQDSIPSRFLDELPEEQVLRNVAEA
GHALPSRSFFRHRAQVLSGQQRARPSAVQPAVPIGATVRHNRYGEGVVIGVEGDRLSINF
ENIGLKRIMAGFIEVVS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcttttttccccccgttttccgtcttccggtcctgattatctgcacgggctg
aatgaagagcagcgtcttgccgtggaaacgacgcaaggccccctgctgattctggctggt
gccggtaccgggaagacccgggttctgacaacacggttcgctcatatcctgctggaaaag
ctggcatggcccgagcagatactggccgtgacctttaccaacaaggctgcccgggaaatg
agggagcgcatcagcgccatcctcggccgaccagtggaaggcctctggttgggaaccttc
cactctctctgtgcccgcatgcttcggcagcatgcgccacatgtcgggctggagcgcaac
ttcaccattctcgatacggacgaccagctccgtcttctcaagcaggtcatagagccctgg
aaactggacctcaagcgctctcctccggcacagatcatgcatcagatccagttatggaaa
gatcaggccctgctgcccgatggcatcactgctgcgcagacacctgaactggccaatggc
cagctcccggccatctacgccgcctatcagatacgtctgaaggaaatgaatgcctgtgat
ttcggggatctcatgctgcatgtggtgaccatcctccgtcagcatcccgatgtactggag
cagtatcagaaacgcttccgctatattctggttgacgaatatcaggatacgaacaccatc
cagtatctgtggttgcgtcttctggccagaaggcaggatggacaaccctctaacattgcc
tgcgtcggggatgacgatcaatccatctattcatggcgtggtgccgacatcgccaatatc
ctccgtttcgagaaagattttcccggtgcacggatcatccggctggagcagaattatcgt
tccaccccccgcatcctgaccgtggcttcgcaggtcattgcccataatgagggacggttg
ggcaaggttctgcggcctgggctcgacatcatggagggtgatcctgtcgaggtcatcaac
atgccggactcggatgacgaggcccgtgtcattggccgccggatacaggagtttcacaca
aaaggtcatccttacggttccatcgccatcctgatgcgggctggtttccagacacgtccc
tttgaagatgccctgatgaaaatgggcatcccctatcagattattggcggtttgcgtttt
tatgaacgggccgagatacgggatgccatcgcctatatgcgggcagtgctgtatcccgtt
gacgatctggcctttgagcgcatcgtcaatctgcccaaacggggatttggcagtgttgcc
ctgacccgtctgcggaatgctgccagagagagggggctgtcccttcaacagacgcttcag
catcagctggaacaggggcagctgaagggcaaggcggccgccacgttgtcggacctgatg
gacagcctctccagggccagagacactgtcagcaaggaaggccatgttgtcgccactgac
atggtgctggaagaaagtgggtatctcgccatgtggcgggatgacccgaagaccatagaa
gccgccggcaggctggacaacatccgggagctgatccgggcgattggtgagtttccaaca
atggatgcgtttctggaacacatcgcccttgtgatggacagcgacaatgccgaggacgat
ccggacaaggtcagcctgatgacgctccacgccgccaaagggcttgagttcccaacggtt
ttcctgcccggatgggaggaaggccttttcccgtcccagcgttctctggatgaaggtgga
aaccaggctctggaggaagaacggcgcctcgcttatgtcggccttacccgtgcccgtgag
cgggtaatcatatcccatgcaaacagtcgtcggctttatgcaaactggcaggattccata
ccaagccgctttctggatgaactgcctgaagaacaggttttacggaatgttgcagaagcc
ggtcacgccctgccctcaaggtcatttttcaggcacagggctcaggttctgtcaggacag
cagcgggccagaccgtccgctgtgcagcctgccgtccccatcggagcgacggtgcgccac
aaccgttacggtgaaggtgtggtcatcggggttgaaggggatcgtctgtccatcaatttt
gaaaatatcggtctgaagcggatcatggccggttttatagaggtcgtatcgtga
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