KEGG   Bombella sp. ESL0368: GN304_08540
Entry
GN304_08540       CDS       T06372                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
bob  Bombella sp. ESL0368
Pathway
bob00521  Streptomycin biosynthesis
bob00523  Polyketide sugar unit biosynthesis
bob00525  Acarbose and validamycin biosynthesis
bob00541  Biosynthesis of various nucleotide sugars
bob01100  Metabolic pathways
bob01110  Biosynthesis of secondary metabolites
bob01250  Biosynthesis of nucleotide sugars
Module
bob_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:bob00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    GN304_08540 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    GN304_08540 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    GN304_08540 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    GN304_08540 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    GN304_08540 (rfbB)
Enzymes [BR:bob01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     GN304_08540 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 adh_short NAD_binding_10 KR Sacchrp_dh_NADP NAD_binding_3
Other DBs
NCBI-ProteinID: QGT76019
LinkDB
Position
complement(1911313..1912368)
AA seq 351 aa
MRVAVTGGCGFIGSAVVRHLMEGTSHQVLNVDCMTYAASEETVAAVASDPRYRHVRISIN
DQPAVEKALAEFQPDAIMHLAAESHVDRSIEGPGAFIQTNIVGTYCLLDVARRYWMGLDG
AKKAGFRFLHISTDEVFGHLSPEDPPFTEETAYDPRSPYSASKAASDHLVRAWYHTYGFP
AFVTNTTNNYGPWHFPEKLIPLMIINALEGKPLPVYGKGENLRDWLFVEDHARALVRAVE
HGRPGETYAIGARQPRSNLEVVRRICALLDELEPDPAGPRERLITFVSDRPGHDFRYEID
PSHAERCLDWEAEHDFETGLRRTVQWYLDNRAWWQRLRRQRYDGRRLGAEA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgagggttgcggtaacaggtggatgcggcttcatagggtccgctgtcgtgcggcacctc
atggaggggaccagccatcaggttctcaatgtggactgcatgacctatgcagcctccgag
gagacggtggctgccgtggcgtccgatccacgctaccgtcatgtgcgtatttccatcaat
gaccagccagccgtggagaaggctctggcagagttccagccggatgccatcatgcatctg
gcagcagagagccatgttgaccgctccatcgaggggccgggtgccttcattcagaccaac
atcgtggggacgtactgtctgctggatgtagcccgccggtactggatggggctggatggg
gcgaagaaggctggattccggtttcttcacatctcgacggacgaggttttcggtcatctg
tcaccggaggatcctccttttacggaggagacggcctacgatccccgcagcccgtattcg
gccagcaaggcggcttccgaccatttggtgcgggcctggtaccatacctatggttttccg
gccttcgtgacgaacacgaccaacaattacgggccctggcatttcccggaaaaactgatc
ccgctcatgatcatcaatgcgctggagggcaagcccctgcctgtttacggcaagggcgag
aatctgcgggactggctctttgtggaggatcacgccagggcactggtccgggctgtggag
catggcagaccgggtgagacttacgccatcggggccaggcagccccgtagcaatctggag
gttgtgcgcaggatatgcgccctgctggatgagctggagccggacccggccggcccgagg
gagcggctgatcacttttgtcagtgacaggccggggcatgacttccggtatgagattgat
cccagccatgccgagcgctgtctcgactgggaggcggagcacgatttcgagacaggcctg
cgcaggactgtccagtggtatctggataacagggcatggtggcagcgcctgcgccgccag
cggtacgatggccggagactgggagctgaggcatga

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