Bombella sp. ESL0368: GN304_08540
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Entry
GN304_08540 CDS
T06372
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bob
Bombella sp. ESL0368
Pathway
bob00521
Streptomycin biosynthesis
bob00523
Polyketide sugar unit biosynthesis
bob00525
Acarbose and validamycin biosynthesis
bob00541
Biosynthesis of various nucleotide sugars
bob01100
Metabolic pathways
bob01110
Biosynthesis of secondary metabolites
bob01250
Biosynthesis of nucleotide sugars
Module
bob_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GN304_08540 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GN304_08540 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GN304_08540 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GN304_08540 (rfbB)
00525 Acarbose and validamycin biosynthesis
GN304_08540 (rfbB)
Enzymes [BR:
bob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GN304_08540 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
KR
Sacchrp_dh_NADP
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QGT76019
LinkDB
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Position
complement(1911313..1912368)
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AA seq
351 aa
AA seq
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MRVAVTGGCGFIGSAVVRHLMEGTSHQVLNVDCMTYAASEETVAAVASDPRYRHVRISIN
DQPAVEKALAEFQPDAIMHLAAESHVDRSIEGPGAFIQTNIVGTYCLLDVARRYWMGLDG
AKKAGFRFLHISTDEVFGHLSPEDPPFTEETAYDPRSPYSASKAASDHLVRAWYHTYGFP
AFVTNTTNNYGPWHFPEKLIPLMIINALEGKPLPVYGKGENLRDWLFVEDHARALVRAVE
HGRPGETYAIGARQPRSNLEVVRRICALLDELEPDPAGPRERLITFVSDRPGHDFRYEID
PSHAERCLDWEAEHDFETGLRRTVQWYLDNRAWWQRLRRQRYDGRRLGAEA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagggttgcggtaacaggtggatgcggcttcatagggtccgctgtcgtgcggcacctc
atggaggggaccagccatcaggttctcaatgtggactgcatgacctatgcagcctccgag
gagacggtggctgccgtggcgtccgatccacgctaccgtcatgtgcgtatttccatcaat
gaccagccagccgtggagaaggctctggcagagttccagccggatgccatcatgcatctg
gcagcagagagccatgttgaccgctccatcgaggggccgggtgccttcattcagaccaac
atcgtggggacgtactgtctgctggatgtagcccgccggtactggatggggctggatggg
gcgaagaaggctggattccggtttcttcacatctcgacggacgaggttttcggtcatctg
tcaccggaggatcctccttttacggaggagacggcctacgatccccgcagcccgtattcg
gccagcaaggcggcttccgaccatttggtgcgggcctggtaccatacctatggttttccg
gccttcgtgacgaacacgaccaacaattacgggccctggcatttcccggaaaaactgatc
ccgctcatgatcatcaatgcgctggagggcaagcccctgcctgtttacggcaagggcgag
aatctgcgggactggctctttgtggaggatcacgccagggcactggtccgggctgtggag
catggcagaccgggtgagacttacgccatcggggccaggcagccccgtagcaatctggag
gttgtgcgcaggatatgcgccctgctggatgagctggagccggacccggccggcccgagg
gagcggctgatcacttttgtcagtgacaggccggggcatgacttccggtatgagattgat
cccagccatgccgagcgctgtctcgactgggaggcggagcacgatttcgagacaggcctg
cgcaggactgtccagtggtatctggataacagggcatggtggcagcgcctgcgccgccag
cggtacgatggccggagactgggagctgaggcatga
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