Brevipalpus obovatus: 141849655
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Entry
141849655 CDS
T11568
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bobo Brevipalpus obovatus
Pathway
bobo03013
Nucleocytoplasmic transport
bobo03015
mRNA surveillance pathway
bobo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bobo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141849655
09122 Translation
03013 Nucleocytoplasmic transport
141849655
03015 mRNA surveillance pathway
141849655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bobo03019
]
141849655
03041 Spliceosome [BR:
bobo03041
]
141849655
03009 Ribosome biogenesis [BR:
bobo03009
]
141849655
03012 Translation factors [BR:
bobo03012
]
141849655
Enzymes [BR:
bobo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141849655
Messenger RNA biogenesis [BR:
bobo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141849655
mRNA cycle factors
Stress granule specific factors
141849655
Spliceosome [BR:
bobo03041
]
Complex C
Other components
EJC/TREX
141849655
Ribosome biogenesis [BR:
bobo03009
]
Eukaryotic type
90S particles
Helicases
141849655
Translation factors [BR:
bobo03012
]
Eukaryotic type
Initiation factors
eIF-4
141849655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
Cas3-like_C_2
UvrD-helicase
Utp25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
141849655
NCBI-ProteinID:
XP_074594172
LinkDB
All DBs
Position
1:complement(11520629..11521992)
AA seq
401 aa
AA seq
DB search
MASSSRRELPEDLSNVEFETSEDVEVIPTFDAMNLREELLRGIYAYGFEKPSAIQQRAIK
PIIKGRDVISQSQSGTGKTATYSIGILQTIDKEIREPQVLILSPTRELAVQIQKVILALG
DYMNVQCHACIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIRRKNLRTRSIKMLVMDEAD
EMLNKGFKEQIYDVYRYLPPFTQVLLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD
MPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcatcaagacgcgagttacctgaagatctatcgaatgtagaatttgagacc
agtgaggatgttgaagtgataccaacatttgatgctatgaatttgcgagaagagctgttg
cgaggtatttatgcttatggtttcgagaaaccatcggctatacagcagagagccatcaag
ccgatcatcaaaggacgtgatgtgatcagtcaatctcaatcaggtaccggtaagacggcc
acatattcgatcggcatactgcaaaccattgataaagagatccgagagccgcaagtgttg
attctcagtccaaccagagaattagctgtacaaatacagaaagtgatacttgctctggga
gattatatgaatgttcaatgtcacgcttgtattggtggaactaatcttggtgaagatata
cgaaaattggattacggtcaacacatagtatctggtacaccaggtcgagtgttcgatatg
attcgaaggaaaaatttgcgaactcgatcaatcaagatgttggttatggatgaggctgat
gagatgcttaacaaaggattcaaggagcaaatttatgatgtctacagatatttgccacca
ttcacccaggttcttctcatctcagccactcttccccatgaaatactagaaatgaccagt
aaattcatgactgatcctattaggattctggtaaagcgagatgaattgactctggaagga
atcaagcagttctttgtggctgttgaacgagaagaatggaaatttgacactctctgtgac
ttgtacgatactttgaccatcacacaggctgtgatattctgtaacaccaaaaggaaagtt
gactggctcacagagaagatgcgtgaggctaattttactgtttcatcaatgcacggtgat
atgcctcaaaaagaacgtgatgctatcatgaaagagttccgatctggacagagtagagtt
ttgataaccactgatgtgtgggctcgtggtatcgatgtacagcaagtttccttggtaatc
aattatgatttgccaaacaacagagaactttacattcatcgtattggtagatcagggcga
ttcggtcgtaaaggagttgccatcaatttcgttaagaatgatgatatcagaatcttacga
gatattgagcaatattatagtactcaaatcgatgaaatgccaatgaatgttgcagatctc
atttaa
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