Brevipalpus obovatus: 141852566
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Entry
141852566 CDS
T11568
Symbol
Prp8
Name
(RefSeq) pre-mRNA processing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
bobo Brevipalpus obovatus
Pathway
bobo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bobo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141852566 (Prp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bobo03041
]
141852566 (Prp8)
Spliceosome [BR:
bobo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141852566 (Prp8)
Complex C
U5 SnRNP specific factors
141852566 (Prp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
141852566
NCBI-ProteinID:
XP_074597710
LinkDB
All DBs
Position
1:25438240..25446298
AA seq
2332 aa
AA seq
DB search
MNYEVCNTNGFLSEEELREKSRKWQQLQSKRYADKRKFGFQDAQKEEMPPEHVRKIIRDH
GDMTSKKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIREVKVLYHITGAITFVDEIP
RVIEPVYIAQWGTMWVMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVDPLEAIRM
DLDPEDDASVYKWFYEHKPLADTKHVNGPSYKQWYLSLPQLASLYKLANQLITDLLDDNY
FYLFDLRSFFTAKALNMSIPGGPKFEPLIKDINPADEDWNEFNDINKIIIRQPIRTEYRI
AFPFLYNNLQQLTNYVHLSWYHTPNVVFIKTEDPDLPAFYFDPLINPISLSRNTQRTIEP
LPDDDKCKDDEAFTLPESFVPYMKSFPLYTDNTANGISLLWAPRPFCMRSGRTRRAIDVP
LVKSWYLEHCPPGMPVKVRVSYQKLLKYFVLNALKHRHPKPQKKRYLFRSFKSTKFFQST
TLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFH
LCREILRLTKLVVDSHVQYRLNNIDAFQLADGLQYIFSHVGQLTGMYRYKYKLMRQIRMC
KDLKHLIYYRFNTGSVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHS
KGIAKTVTKQRVESHFDLELRASVMHDILDMMPEGIKQNKAKTILHHLSEAWRCWKANIP
WKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLK
AEQERQHNYLKDGPYVGPEEAVAIYTTFVHWLESRRFSPIVFPPLSYKHDTKLLILALER
LKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVSIEFMDLYSHL
IPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADSEPPPLLVYKWCQGINNLHNV
WDTSEGECNVLLESKFEKLYEKIDLTLLNRFLRLIVDHNIADYMTAKNNIIINYKDMNHM
NSHGIIRGLQFASFIVQYYGLILDLLVLGLHRGSEMSGPPSVPNDFLQFQDVSTEEAHPI
RLYCRYIDRIHIFFRFNAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKH
DVNLGRAVFWDIKNRLPRSLTTVDWENSFVCVYSKDNPNLLFNMSGFECRILPKCRMTQE
EFAHKDGMWNLQNEITKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNT
ALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGL
GMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQVIPNLYRYIQPWETEFIDSQRV
WAEYALKRQEALTQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQY
QVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEK
ASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGK
IPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEVETVQKETIHPRKSYKMNSS
CADILLFATFKWTISRPSLLADSDERDTTDGTTSQKYWIDVQLRWGDYDSHDVERYARAK
FLDYTQDNMSIYPSPTGVLIAIDLAYNLHSAFGNWFPGCKKLIQQAMTKIMKANPALYVL
RERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPI
NGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV
TRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEQFGDLILKATEPQMVLFNLYDDW
LKTISSYTAFSRLILILRALHVNNERTKVALKPDKTTITEPHHIWPTLSDEEWVPVEVQL
KDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATT
TRTVNKHGDEIITSTTSNYESQTYASQTEWRIRAISATNLHLRTKQIYVNSDDVKETGFT
YILPKNVLKTFIVISDLRTQIAGYLYGRSPSDNPQVKEIHCIVMPPQYGSHQLVHLPNTL
PTHEILEEMEPLGWIHTQPNELPQLSPQDITTHAKIMADNPIWDADKTVVITCSFTPGSC
SMTAYKLTPTGYEWGRSNTDRGNNPKGYLPSHYEKVQMLLSERFQGFFMVPAQGSWNYNF
IGVSHSPNMKYDVKFGRPKAFYHEVHRTNHFLKFSALEEYDNNGLEHENLFA
NT seq
6999 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaagtgtgtaataccaatggctttctctctgaggaggagctcagggaaaag
tctcgtaaatggcagcaactccagtccaaaaggtacgctgataagcgtaaatttggtttt
caagatgcgcaaaaagaagagatgccacctgaacatgttcgtaaaattattcgagatcat
ggtgatatgaccagtaaaaagtataggcatgataagagagtatatcttggcgctttgaag
tacatgcctcatgctgtccttaagctactggaaaatatgcccatgccatgggaacaaatc
agagaagtcaaagtattgtatcacataactggtgctattacgtttgttgacgagattcct
cgggtgatcgagccggtctatattgcacaatggggtaccatgtgggtcatgatgaggaga
gaaaaacgtgatcgtaggcattttaagcgaatgagatttccacctttcgatgatgaagaa
ccacctctagattatgctgataacgttctagatgttgacccattggaggctattcggatg
gatttggatccagaagatgatgcttcggtatataaatggttctatgaacacaagccgttg
gcagacacaaagcatgtgaatggaccatcctacaagcaatggtatctaagtttacctcag
ctggcaagtttgtacaagttggccaatcaactgattactgacttgctcgatgacaactat
ttctacctctttgatttgagatcattcttcactgctaaagcattgaacatgtctatacct
ggtggaccaaaatttgaacctctcatcaaagatatcaaccctgctgatgaggattggaat
gaattcaacgatataaataagattatcattcgccaacccatcagaactgaatatcgaatc
gcctttccatttttgtataataatctccaacaactgacaaattatgttcatttatcatgg
tatcatacaccaaacgtggtattcataaaaaccgaagatcctgatctgccagctttttat
ttcgaccctctgatcaaccctatatctctcagtcgtaacactcaaagaactattgaacca
cttccagatgatgataagtgcaaagatgacgaagccttcacgcttccagaatcttttgtc
ccttacatgaagagttttcctctctacactgacaataccgccaatggaatctccttgttg
tgggctcctcggccattttgtatgagatcaggtcgtactaggagagcaattgacgtacca
ttggtaaaatcttggtaccttgaacactgtcctcctggtatgccagttaaggttcgtgtg
tcttatcagaagctgttgaaatattttgtcttgaatgctctcaagcatcgtcatccaaaa
cctcagaagaaacgctatctgttccgatcatttaaatcaaccaaattcttccaatccacc
acattagattgggttgaagcaggtctccaagtctgtagacaaggttacaacatgcttaac
cttttaattcatcgaaagaacctcaattatctccatcttgattacaatttcaatctaaaa
cctgtgaaaactttaaccaccaaggagcgaaaaaaatcaagattcggtaatgcttttcac
ttatgtcgtgaaattctccgtctcacaaagcttgtcgtggacagtcatgtccaatatcga
ctgaacaacattgacgcattccaattagccgatggcttacaatacatattttctcatgtc
ggtcaacttactggaatgtacagatacaaatacaaacttatgcgtcagattcgaatgtgc
aaagatctcaagcatctcatttactaccgtttcaacacaggtagtgtaggtaaaggtcca
ggatgtggtttctgggctcctggttggagagtttggttattcttcatgagaggtatcact
cctctcctagaaaggtggctaggtaatctattatctcgacagttcgaaggcagacattct
aaaggaatcgctaagactgtgacaaagcaaagagttgaaagtcattttgatcttgagctt
agagcatctgttatgcacgacattttagacatgatgccagagggaatcaaacaaaacaaa
gccaaaacaattctacatcatttgagtgaagcatggcggtgttggaaagctaacatccct
tggaaagttcctggtctaccgatacctatagagaatatgatcttgagatatgtaaaaatg
aaagcagattggtggacgaacactgctcattacaacagggagcgaattcgtcgaggtgcc
actgtagataaaactgtttgtaagaaaaatcttggtcgtttaactagattatatctcaaa
gcagaacaagaacgtcagcacaactatctgaaagatggtccatatgtgggtcctgaggaa
gcagtggccatctatactacatttgttcactggttagagagtagaagattctctcctatt
gttttccctccactctcttacaaacatgatacaaagttgctgattctagctctcgaaaga
ctcaaggaagcttacagtgttaagtctcgcctgaatcagtcccaaagagaagagctcggt
ctcattgaacaggcctacgataatcctcatgaagccctctctcgaatcaaacgacatctt
ctaactcagagagctttcaaggaagttagcatcgaatttatggatttatactctcatctg
ataccagtttatgaggttgaaccacttgaaaaaataacagatgcctatctcgaccagtat
ctctggtatgaggctgataagcggcgactcttccctccatggatcaaacctgcagattca
gagcctcctccattgctcgtatacaagtggtgtcaaggtatcaacaatcttcacaacgtg
tgggatactagtgaaggggaatgcaacgttctcctagagtctaagttcgaaaagctctat
gaaaagatcgatcttactcttctcaatcgatttctccgcctgattgtcgaccacaatatt
gctgactacatgactgctaagaacaatatcatcataaattacaaagacatgaaccacatg
aattctcatggaatcattcgaggccttcagtttgcatctttcattgttcagtattacgga
ctgatattggacctcctcgtcttgggacttcatcgaggtagcgagatgtctggccctcct
tcagttcccaacgacttcctacagtttcaggatgtaagcaccgaagaagctcatcccatc
cgtttgtattgtcgttatatcgatcgcattcacatatttttccgattcaatgctgaagaa
gcgagagatcttatacagcgatatttgactgagcatcctgatcctaataatgagaatatc
gtaggatacaacaacaagaaatgctggcccagagatgctcgaatgcgcttgatgaagcac
gatgtcaatttgggtcgtgcagtcttctgggacatcaaaaatcgtctccctcgatctttg
actaccgtcgattgggagaatagttttgtctgcgtttacagtaaagataatcctaacctg
ctcttcaacatgtcaggctttgaatgtcgaatcttgccaaaatgtcgtatgactcaagaa
gaattcgcccataaggatggtatgtggaatctgcagaatgaaattacaaaggagcgaacc
gcacagtgtttcttgcgagtcgatgatgagtcaatgcagcgtttccacaatcgagtccgt
caaatcttgatggcatctggatctacgactttcacaaagattgtaaataagtggaacacc
gcactcattggtcttatgacttatttccgtgaggctgtggttaatactcaggagttgttg
gatctactagtcaagtgtgaaaacaaaattcaaacccgtatcaagattggactcaactca
aaaatgcccagtcgttttccaccagtcgtcttctatacacccaaagagttgggtgggctc
ggtatgctttccatggggcatgttctcattccgcagagtgatctacgttggtccaagcaa
actgatgtcggaatcactcacttccgttctggaatgagtcatgatgaagatcaggtcatt
cctaacctttaccgatatattcagccttgggaaacagaattcatagactcacagcgagta
tgggctgagtatgccctaaaacgtcaagaagcgcttacacaaaaccgaaggctcacacta
gaagatctcgaagacagttgggaccgaggaataccgcgaatcaacactctcttccagaaa
gatcgacacactctcgcctatgataagggctggagagtgagaactgatttcaagcagtat
caagttctgaagcagaatcctttctggtggactcatcaacgacacgatggtaaactttgg
aatctaaacaactaccgaactgatatgatccaagcactcggtggagtagaaggaatcctg
gaacatacactcttcaaaggcacttacttcccaacatgggaaggactattctgggagaag
gctagtggtttcgaagagtcaatgaagtataagaaactgaccaatgcccagagatcaggt
ctgaatcagattccaaatcgacgatttactctctggtggtctccaactatcaatcgtgca
aatgtttacgttggtttccaagttcaactcgatctaactggcatattcatgcatggaaaa
attcctactctcaaaatttctctgattcaaatcttcagagcccatttatggcagaaaatt
cacgaaagcattgtcatggatctttgtcaagtttttgatcaagaacttgatgcgctcgaa
gttgagacagtgcagaaagaaacaatccatcctcgtaaatcatacaaaatgaacagttct
tgtgctgatattcttctttttgctaccttcaagtggacaatctctcgaccatctctactc
gccgatagtgacgagagagatacaactgatggtacaacctctcaaaaatattggatcgac
gttcaattacgttggggtgattatgactctcatgatgtcgagcgttacgccagagcgaag
tttctggactatacgcaagataatatgagtatttatccctcaccaactggtgttttgatt
gccattgatctcgcatacaatttgcattctgcttttggcaattggttcccgggctgtaaa
aagttgattcaacaagcaatgacaaagataatgaaagctaatcctgctctctacgtactt
cgcgaacgtattcgtaaaggtttacagctatactcttcagagccaacggagccttatcta
tcctctcaaaactatggtgaactattttccaatcagattatttggtttgttgatgacact
aacgtatatcgagtaaccattcacaaaacattcgaaggtaacttgacaacaaagccaatt
aatggtgcgatcttcatcttcaatccaagaactgggcaacttttcctcaaaataattcat
accagtgtctgggctggtcaaaagcgtctgggacagcttgccaaatggaaaacagccgaa
gaagttgctgcgttgattagatctctgcctgttgaggagcagccaaagcaaataatcgtc
acaagaaagggtatgcttgaccctcttgaggtgcatctcctcgattttccgaacatcgtc
atcaaaggcagtgaacttcagctacccttccaagcttgtctcaaagttgaacaatttggt
gatctcattctaaaagccaccgaacctcaaatggtcctcttcaatctctacgatgattgg
ctcaagaccatatcgtcatatacagccttttctcgtctcatcttgatcttgagagctctc
catgtgaataacgagagaacaaaggtagccctcaagcctgataaaacaaccatcacagaa
cctcatcatatttggccaacattgagcgacgaagagtgggttccagtggaagtccaactg
aaagatctcatactcgctgattatggcaaaaagaacaatgtaaacgttgcatctttgact
caatcagaaatccgagacattatcttgggtatggaaatatctgctccatcagctcagagg
cagcaaattgcagagattgagaaacaaaccaaagaacagtctcaattgactgctacaaca
actcgtaccgtgaataagcacggtgatgaaataatcacatctacaaccagcaattacgag
tcacaaacgtatgctagtcaaactgaatggaggatcagggctatttctgcaaccaacctc
catcttcgaaccaagcaaatatatgtcaattctgatgatgtgaaagagactggtttcact
tacatactccctaaaaatgtcttgaaaacttttatcgtgatatcagacctacgcacgcag
atcgctggctacctttatggacgaagtccaagtgacaatcctcaggtcaaagaaattcat
tgcatcgttatgcctccacagtatggctctcatcaactcgttcatttgcccaacactctt
cccacacatgagattttagaagaaatggaaccactcggctggattcatactcaaccgaat
gaattgccacaactctctcctcaagatattaccactcatgctaaaattatggctgataat
ccaatctgggacgctgataaaaccgtcgtgatcacctgcagttttactcctggttcatgc
tctatgacagcttacaagttgactcctacaggctatgaatggggtcgatcaaatactgat
cgaggaaataatccgaagggatatttaccctctcattatgaaaaagttcagatgctgctt
tcggaacgatttcagggatttttcatggttccagctcaaggttcatggaattataacttc
ataggtgtaagtcacagccctaatatgaagtacgatgtaaagtttggtcgtcctaaagca
ttctatcacgaagtacatcggacaaatcatttcctcaaattcagcgcattagaagaatac
gacaacaatggacttgaacacgaaaatctgtttgcttaa
DBGET
integrated database retrieval system
