Brevipalpus obovatus: 141856524
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Entry
141856524 CDS
T11568
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase 25E
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bobo Brevipalpus obovatus
Pathway
bobo03013
Nucleocytoplasmic transport
bobo03015
mRNA surveillance pathway
bobo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bobo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141856524 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
141856524 (Hel25E)
03015 mRNA surveillance pathway
141856524 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bobo03019
]
141856524 (Hel25E)
03041 Spliceosome [BR:
bobo03041
]
141856524 (Hel25E)
Enzymes [BR:
bobo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141856524 (Hel25E)
Messenger RNA biogenesis [BR:
bobo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141856524 (Hel25E)
Spliceosome [BR:
bobo03041
]
Complex C
Other components
EJC/TREX
141856524 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141856524 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Thioredoxin_6
Utp25_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
141856524
NCBI-ProteinID:
XP_074602957
LinkDB
All DBs
Position
2:32407507..32410398
AA seq
430 aa
AA seq
DB search
MTENETELLDYEEEEEQTSALVADNNNLQADNNVSEAKKGGYVSIHSSGFRDFLLKPELL
RAIIDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDPVDGQVSVL
VMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGISTANDEKTLKTNTPHIVVGTPGRIL
ALVKSRKLNLKHLKHFILDECDKMLEQLDMRKDVQEIFKATPHEKQVMMFSATLSKDIRP
VCKKFMQDPLEVYVDDEAKLTLHGLQQYYVKLKDTEKNRKLFELLDVLEFNQVVIFVKSV
TRCVALAQLLVEQNFPAIGIHREMNQQERLSRYQQFKDFHKRILVATNLFGRGMDIERVN
IVFNYDMPESSDTYLHRVARAGRFGTKGLAITFISDENDATVLNEVQERFDVSIPVLPEK
IDISSYIEGR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaacgaaactgaattgttagactatgaagaggaagaagagcaaacttccgca
ctggtcgccgacaataacaatctgcaagctgataataatgtttccgaggctaaaaagggt
ggctatgtatccatacacagctccggttttcgagattttctattgaaaccggagcttctc
agagcgataattgattgtggtttcgaacatccaagtgaagttcaacatgaatgtatacct
caagccatcctcggtatggatattctctgtcaagctaagtcaggaatgggaaagactgct
gtgtttgttctcgcaactctacaacaattagatcctgtagatggacaggtatccgttttg
gtcatgtgtcatacccgtgaattggctttccagatcagtaaagaatacgagagattttcg
aagtatatgccgtctgtcaaagttgccgttttctttggtggaatcagcaccgctaacgat
gagaagacactcaaaacaaacacaccgcatatcgtggttggaacacctggtcgaattctg
gcactggtcaagagtcgaaagttgaacctcaaacacctcaaacatttcatcctggacgaa
tgtgacaaaatgttggagcaattagacatgcgaaaggatgtccaagagattttcaaagca
actcctcatgagaaacaagtgatgatgttcagtgctacactttcgaaagatattagacca
gtttgcaaaaagttcatgcaggatccattggaagtgtatgttgacgatgaggccaaactc
acacttcatggtttgcagcagtattacgttaaactcaaggatactgagaagaatcgtaaa
ctttttgagctattggacgttctcgaattcaatcaagtggtgattttcgtcaaatctgtg
acaagatgtgttgcccttgctcaacttttagtggaacaaaactttcccgctattggcatt
catcgagaaatgaatcaacaagagagattgtcaagatatcagcagttcaaggacttccac
aaaagaatcctagtagccactaatctctttggccgaggtatggatatcgagcgagtgaac
atcgtcttcaattacgatatgcccgaaagctcagacacgtatttgcatagagttgctcgt
gctggtagatttggtaccaaaggtctcgcgataactttcataagcgacgaaaatgatgcc
acagtccttaacgaagtccaagagcgtttcgatgttagcatacctgttctccctgaaaaa
atagatatttccagctacatcgaaggccgataa
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