Brevipalpus obovatus: 141858574
Help
Entry
141858574 CDS
T11568
Symbol
Polr2A
Name
(RefSeq) RNA polymerase II subunit RpII215
Organism
bobo Brevipalpus obovatus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
141858574
NCBI-ProteinID:
XP_074605461
LinkDB
All DBs
Position
1:complement(5535607..5543170)
Genome browser
AA seq
1863 aa
AA seq
DB search
MAMVQDSKAPLRDIKRIQFGILSPEEVKRMSVTEGGIKYPEIYENGRPKLGGLMDPRQGV
IDRSARCQSCAGTMTECPGHFGHIELAKPVFHPGFMNKILKTLRCVCFYCSKLLVSPNNP
KIKEVVNETRGNPRKRLTHVYDLCKTKNMCEGGDDIDLKKDVDYAELAENESKKIGHGGC
GRYQPTLRRTGLQLYAEWKHLNEDSQEKKIELAAERVHEIFKHISDEECIVLGMDPKFAR
PDWMCITILPVPPLPVRPAVVMFGSARNQDDLTHKLSDIVKTNQELIRNEQSGAPASIIA
EVTNLLQFHVATLIDNELPGIPRAMQKSGRPLKSIKQRLKSKEGRIRGNLMGKRVDFSAR
TVITPDPNLRIDEVGVPRSIAQNLTFPEIVTPFNIDKMYELVQRGNNQYPGAKYIIRDNG
ERIDLRFHPKSSDLHLQYGYKVERHIRNGDIVVFNRQPTLHKMSMMGHRIRVLPWSTFRL
NLSVTTPYNADFDGDEMNLHVPQSLETKAEIEQLAMVPRMIVTPQSNKPVMGIVQDTLTA
VRKMTKRDVFLTSEQFMNLLCFLPTWDGKIPMPAIIKPQPLWTGKQLFSLIIPGNVNLIR
NHSTHPDDEDDGPYRWISPGDTKVLIEQGQLLSGIVCSKTVGSASGSLMHVVFNEHGHEI
AGAFYGHIQTVVNNWLLLEGHTIGIGDTFADPQTYSDIQATIKKAKQDVIEVIEKAHNDE
LEPTAGNTLRQTFENKVNRILNDARDKTGASAQRSLSEYNNFKAMVVAGSKGSKINISQV
IACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHSMGGR
EGLIDTAVKTAETGYIQRRLIKAMESIMVAYDGTVRNSNGQVIQLRYGEDGLDGAAVEFQ
SLPTLKPNNQAFDQRFRFEANNERYLRKIFTDEVVSEISGSARAASMLEREWDELKKDRQ
SLREIFPTGDSRVVLPCNLQRMIWNAQKIFHVNMRGQTELSPLRVIESVEELIKKLIVVP
GKDELSIKANNNATLLFRALVRSTLCTKKVAEEYRLSTEAFDWLIGEIETRFQQAQAQPG
EMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFLT
GKAARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNSVIVEDQEFVNVYYEMPDFDT
SRISPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLILRIRIMNS
DEKMEDEEQVDKMEDDVFLRCIEASMLSDITLQGIESIAKVYMHLPTTDNKKKITITETG
EYKPVAEWLLETDGTSLMRVLSERGVDPVRTYSNDICEIFQVLGIEAVRKAVEKELNHVI
SFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDVGCLMRCSFEETVDVLIDAASHA
EVDYLRGVSERVMVGQLAKLGSGAFSLLLDPDKCKYGMELPTAPIGMGMLVGPGIFVGAK
SPGGTAMTPWAQGATPGYSTPYGSVMPGMTPGGPGFSPSVAFSPSAASEVSGMSPGFSPS
WASPSHGSPTSPSPYIPSPAGATSPSYSPSSPAYGPMSPASPGYSPTSPSYSPTSPNYSP
TSPKYSPTSPNYSPASPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPRSPSYSSPASPRYSPTSPSFSPTSPN
YSPTSPSYSPTSPSYSPHTSPTYSPTSPSYSPTSPSYSPTSQNYSPTSPSYSPTSPSSYS
PPR
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggttcaagatagtaaagctcctctcagggacattaagagaatacagtttggt
attctctctccagaggaggtgaaacgtatgtcggttactgaaggcggcatcaaatatcca
gagatttatgagaatggacggccaaaattaggtggacttatggatccacggcagggtgta
attgatcggtcagcacggtgtcaaagttgtgctggcacaatgaccgaatgtcctggacat
tttggtcacattgagctggctaaacctgtctttcatccaggatttatgaacaaaattctc
aaaactttacgttgtgtttgcttttattgttccaaattgcttgtctcgccgaacaatccc
aaaatcaaagaggttgtcaacgaaactcgtggtaatcctcgtaaacgattgactcatgtt
tatgatttgtgtaaaacgaaaaatatgtgtgaaggtggtgacgatattgatctcaagaag
gatgttgattatgccgaattggctgagaatgagtccaaaaagatcggacatggaggttgt
ggccgatatcagcctactttgagacgcacaggtctacaattgtacgcagagtggaagcat
ctcaacgaagatagccaagagaagaaaattgagttggccgctgaacgtgttcatgaaatt
ttcaaacacatatctgatgaagagtgtatcgtacttggtatggatccaaaattcgctagg
cctgattggatgtgtatcactattctgccggttccaccacttccagtaagaccagctgtt
gttatgttcggctcggccagaaatcaagacgatctcactcataaattatctgatattgta
aaaactaatcaagaacttattagaaatgagcaatctggtgctccagcttccatcatagca
gaagtaaccaatctattgcaattccatgttgctacgctgatagataatgagcttcctggt
attccaagagctatgcaaaagtctggacgtccactcaagtccatcaaacagcgtctcaaa
tccaaagagggtcgtattcgtggtaatcttatgggtaaaagagtagatttttctgctcgt
acagtcatcactcctgatcccaatttacggattgatgaagttggagtaccacgatctatt
gctcaaaacttgactttccctgaaattgtgaccccttttaacattgacaagatgtatgaa
ctcgttcaaagaggcaataatcaatatccgggtgctaaatatattatcagagacaatggt
gagcgtattgacttgcgattccatccaaaatctagcgatctccatcttcaatacggatat
aaagttgagcgtcatataagaaacggtgatatagtcgtatttaatcgtcaacctactctt
cacaaaatgtctatgatgggtcatcgtataagagttctaccgtggtctacttttcggttg
aatttatctgtcacaacaccttacaatgctgattttgatggtgatgaaatgaatcttcat
gttcctcaaagcttggagacgaaagctgaaattgaacagcttgccatggttcctagaatg
atcgttactccacaatcaaataagcctgtgatgggtatcgtccaagatactctaaccgct
gtccgtaagatgaccaagcgtgatgtcttcttaacatcagagcaattcatgaaccttttg
tgcttcttacccacctgggatggtaaaatacccatgcctgccatcatcaaacctcagcct
ctctggactgggaaacaattattcagtttaattattcctggtaacgttaatttgattcgt
aatcacagtactcatccagatgatgaagatgatggtccatatcgttggatcagtcctggt
gataccaaagttctcattgagcaaggacagctgttgtctggaattgtctgttctaaaact
gttggttctgcatcaggttctctcatgcacgttgtcttcaatgagcatggacatgagatt
gcaggagcattttatggccatatccagacagtagttaataattggttgcttttggaagga
cacactataggtattggggataccttcgctgatcctcaaacttactcagatattcaagct
acgatcaagaaagctaaacaagacgtgatagaggtcatcgaaaaagcgcacaacgatgaa
ctagagcctacagcaggaaacactcttcgacaaacattcgagaacaaagttaatcgaatt
ttgaatgatgctcgagataagactggtgcatccgctcaaagatctctttctgaatacaat
aatttcaaagctatggttgttgctggttctaaaggttccaagattaacatatctcaagtt
attgcttgcgtaggtcaacagaacgtagaaggtaaacgaattccttttggttttcgtaaa
agaacactacctcatttcattaaggatgactacggtcctgagagtaggggctttgtagag
aactcgtatcttgctggtttgacgccatcagaattctttttccattccatgggaggtcgt
gaaggtttgatcgatacagctgtgaagacagccgaaactggatacattcagcgtcgtttg
atcaaagctatggagtctatcatggtagcttatgacggtactgtgagaaattctaatggg
caagtgattcaattgcgctacggtgaagatggtctcgatggtgcagctgtcgagtttcag
tcattacccaccttgaaacctaataatcaagctttcgaccaacgattccgttttgaagcc
aacaatgaacggtatcttcgtaaaattttcaccgatgaggtggtctcagagatctcaggt
agtgctagagctgcatcaatgttggagagggaatgggacgaactcaaaaaggacagacaa
agtttgagagaaatttttcctactggtgacagccgagtggtgttgccttgtaaccttcaa
cgtatgatatggaatgctcaaaaaattttccatgtaaatatgcgaggacaaaccgagctc
agtcctttgagagttattgaaagtgttgaagagttgatcaaaaaactgattgttgtccct
ggcaaggacgaactgtcgataaaggccaataacaatgccactcttctcttccgggccctc
gttcgctctactctttgtaccaaaaaagtagcagaagaatacagactttcaacagaggct
ttcgactggctcattggagaaattgaaacccgtttccaacaagcacaggctcaacctggt
gaaatggtaggtgctctggctgctcaaagtttgggtgaaccggctactcaaatgaccctc
aacactttccattatgctggtgtatcagccaaaaacgttacacttggtgttcctcgtctt
aaggaaattatcaacatatccaaaaaaccgaaaactccatctctcactgtgttcttaact
ggcaaagcagctagagatgccgaaaaagccaaggatgttctatgtagacttgaacatact
acactaagaaaagtaaccgcaaacacagctatttattatgaccctgatcctcagaactct
gtgattgtggaagatcaagagtttgtgaacgtctactatgaaatgccagactttgatacc
tctcgtatttccccatggcttctgcgtattgagcttgaccggaaaagaatgactgataag
aaacttactatggagcagattgctgaaaagatcaatgcaggttttggagatgatctaaat
tgtatattcaatgacgataatgccgaaaaactcattttgagaatacgaataatgaattct
gatgagaaaatggaagatgaggaacaagttgacaaaatggaagatgacgttttcctccgt
tgtattgaggcttcgatgctttcagatatcacacttcaaggaatagaatcaattgctaaa
gtttatatgcaccttccaactactgacaataagaagaaaatcaccatcacagaaactggt
gaatacaaacctgttgctgaatggcttcttgagactgatggtacttcattgatgagagtt
ctttcagaaagaggggttgatccagttcgaacatattccaacgatatttgcgaaatcttc
caagttctcggaatcgaagccgttagaaaagcagttgaaaaggaacttaatcatgtcatt
tccttcgacggttcttatgtaaattatcgacatcttgctcttctttgtgatgtaatgaca
gccaaaggacatttgatggccataacgcgtcatggcataaatcgacaagatgttggttgc
ttaatgcgatgttcttttgaagaaactgtcgacgttcttatagatgcggcatctcatgca
gaggttgactaccttcgaggtgtttcagagagagtgatggttggccaattagctaaattg
ggtagtggtgcctttagtttgctcttggaccctgataaatgcaaatacggtatggaatta
cccactgcacccattggaatgggtatgctagttggtcctggaattttcgtcggagctaag
agtcctggtggaactgcaatgactccttgggctcaaggagcaactcctggttattcgaca
ccatacggctctgttatgcctggtatgacacccggtggacctggattctctccatcagtt
gcattctcaccatcagccgcctcagaagttagtggtatgagccctggtttcagtccttca
tgggcatcaccaagccatggatcacccacctcaccgtcgccttatataccaagtcctgct
ggtgcaacctccccaagctattcgccatcgtcaccagcttacgggcccatgtcaccagct
agtcctggctattcgcctactagcccgtcatattccccgactagccccaactattcacca
acttctcccaagtattctcctactagccccaactatagtcctgcaagtccatcgtactct
ccgactagcccctcttactcgccaacttcaccgagctatagtccaacgagtccaaactat
agtcctaccagtccatcgtactctccgacgagtccttcctactcgccaacgagtccaagc
tattctccaacctctccatcttattctccgacgagtcctagttactctcctacgagccca
agttactctccaacttcaccgagctacagtcctacaagtccttcctattctccaactagc
ccatcttattctcctacaagtccctcttattcgccaacatcaccttcttattcaccgact
tcaccgtcatactctcctacgagtccctcctattcgccaaccagcccgagttactcgcca
acgagtccacgatactctccgaccagtccaagctattccccacgttcacccagctattcg
agcccagcttcaccgagatattctccaacatcgccaagcttcagtccaaccagtcccaat
tatagtccaacttcaccatcatactcgcctacaagcccatcctactcgcctcacacgagc
ccgacttattctcctactagtccgagttattctccgaccagtccgagttattctccaact
tcacagaactacagcccaaccagtcccagctacagtcctacgagcccatcatcttattca
cctcctcgttaa
DBGET
integrated database retrieval system
