Burkholderia oklahomensis C6786: BG90_1795
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Entry
BG90_1795 CDS
T03861
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG90_1795 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boc03019
]
BG90_1795 (recQ)
03400 DNA repair and recombination proteins [BR:
boc03400
]
BG90_1795 (recQ)
Enzymes [BR:
boc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG90_1795 (recQ)
Messenger RNA biogenesis [BR:
boc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BG90_1795 (recQ)
DNA repair and recombination proteins [BR:
boc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BG90_1795 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Tuberculin
Motif
Other DBs
NCBI-ProteinID:
AJX31927
LinkDB
All DBs
Position
I:1993096..1994943
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AA seq
615 aa
AA seq
DB search
MSRALEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRNEAGC
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPER
LMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFGIRQRHQEMFQREEGVVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
THKRVQTSKLDALLGLCETASCRRVRLLAYFGETSAPCGNCDTCIEPPATWDATREARMA
LSCVFRAQRASGFNFGASHLIEVLRGARNEKVLQRGHENLSTFGIGAELSEPEWRAIFRQ
LVAFGYLAVDHGGFGALVLTEASKPVLKGEETVTLRRYVKPARTRQSSGRSGARVDPTAG
MNPRERACWERLRAWRAETAKSDGVPAYVIFHDATLAEIARNAPESIEDLRHIPGIGARK
LDRFGDEILEVVEAA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgcgctcgaaattctcaacgaagtctttggctatcccgccttccgaggtcaa
cagggcgagatcgtcgagcacgtcgcggcgggcggcgactgcctcgtgctgatgccgacg
ggtggcggcaagtcgctctgctaccagattccggcgctcgtgcgcaacgaggctggctgc
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgctt
tccgaagtcggcgtgcgcgccgcgtatctgaattcgacgctctccggcgccgaggcggcc
gcgaccgagcgcgcgctgcgcgacggggacatcgatctgctctatgtcgcgcccgagcgg
ctgatgacgccgcgcttcctcgatctgctcgagcgcgcccgcatcggcctcttcgcaatc
gacgaggcgcactgcgtgtcgcagtgggggcacgatttccggcccgagtacatccagttg
tcggtgctgcacgagcgtttcccggacgtgccgcgaatcgcgctgacggcgaccgccgac
gcgatcacgcgcgacgagatcgtccagcggctcgcgctcgacgacgcgcggattttcgtg
tcgagcttcgatcggccgaacatccgctaccggattgtcgagaaggacaacgcgcgcgcg
cagctgctcgatttcatccgggcggagcacacgaatgcggacggcacgaccgacgcgggc
gtcgtctactgcctgtcgcgccgcaaggtcgaggagacggccgagtggctgaaggcgcaa
ggggttcgtgcgctgccgtatcacgcggggatggaattcggaatccggcagaggcaccag
gagatgttccagcgcgaggaaggcgtcgtcatgtgcgcgacgatcgcgttcggaatgggc
atcgacaagccggacgtgcgcttcgtcgcgcacctcgatttgccgaagagcgtcgaaggc
tactaccaggagacgggtcgcgcgggccgcgacggcatgcccgccaacgcgtggatggcg
tacgggctcggcgacgtggtccagcagcgcaagatgatcgacgagtcggacgccgacgac
acgcacaagcgcgtccagacgtcgaagctcgacgcgctgctcgggctgtgcgagacggcg
tcgtgccgccgcgtccggctgctcgcgtatttcggcgagacgagcgcaccgtgcggcaac
tgcgacacctgcatcgagccgccggcgacgtgggatgcgacgcgcgaggcgcggatggcg
ctgtcgtgcgtgttccgtgcgcagcgcgcgagcggcttcaacttcggcgcgagccacctg
atcgaagtgctgcgcggcgcgcgcaacgagaaggtactgcagcgcggccacgagaatctc
agcacgttcggcatcggcgccgagctgtccgagcccgaatggcgcgcgatcttccggcag
ctcgtcgcgttcggctacctcgccgtcgatcacggcggcttcggcgcgctcgtgctgacc
gaggcgagcaagccggtgctcaagggcgaggagacggtcacgctgcgccgctacgtgaag
ccggcgcgcacccgccagtcgtcgggccgcagcggcgcacgcgtcgatccgacggccggc
atgaatccgcgcgagcgcgcgtgctgggagcggctgcgcgcgtggcgggcggagaccgcg
aagagcgacggcgtgcccgcgtacgtgatcttccacgacgcgacgctcgcggagatcgcc
cgcaacgcgccggagtcgatcgaagatctgcgccatattccagggatcggcgcgcgcaag
ctcgaccgcttcggcgacgagatcctcgaggtcgtcgaagcggcctga
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