Burkholderia oklahomensis C6786: BG90_1838
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Entry
BG90_1838 CDS
T03861
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc00300
Lysine biosynthesis
boc00470
D-Amino acid metabolism
boc01100
Metabolic pathways
boc01110
Biosynthesis of secondary metabolites
boc01120
Microbial metabolism in diverse environments
boc01230
Biosynthesis of amino acids
Module
boc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BG90_1838 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BG90_1838 (lysA)
Enzymes [BR:
boc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BG90_1838 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
Exo70_N
Motif
Other DBs
NCBI-ProteinID:
AJX31507
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All DBs
Position
I:complement(2025293..2026564)
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AA seq
423 aa
AA seq
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MTQAAFDYVDGTLHAERVAAAELAERFGTPLFVYSRAALTAAYDAYAKACAGRRASVHVA
VKANSNLGVLNVFARLGAGFDIVSGGELARVLAAGGRAQNVVFSGVGKSADEMRAALEAG
VKCFNVESTPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDEA
RATYRAAAALPNLDVVGIDCHIGSQITELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGG
GLGITYDDETPPDIGAYVRAVLERIDARGHGHREIWFEPGRSLTGNAGILLTRVEFLKQG
DEKNFAIVDAAMNDLARPAMYEAFHAIEPVKPRTDIATAVYDVVGPVCESGDWLGRERSL
AIAPGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAYLVRPRETVESLFERESVLP
GGK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagctgcatttgactacgtcgacggcacgctccacgccgagcgcgtcgccgcc
gccgaactcgccgagcgtttcggcaccccgctgttcgtctattcgcgcgccgcgctcacc
gcggcctacgacgcttatgcgaaagcgtgcgcgggccgccgcgcgtcggttcacgtcgcc
gtgaaggcgaacagcaacctcggcgtgctgaacgtgttcgcgcggcttggcgcgggcttc
gacatcgtgtcgggcggcgagctcgcccgcgtgctcgccgcaggcggccgcgcgcagaac
gtcgtgttctcgggcgtcggcaagagcgcggacgaaatgcgcgccgcgctcgaagcgggc
gtcaaatgcttcaacgtcgaatcgaccccggaactcgaccggctgaacgccgtcgccgcg
tcactcggcaagcgcgcgcccgtgtcgctgcgcgtgaatccggatgtcgatccgaagacg
catccgtacatctcgaccgggctgaaagcgaacaagttcggcatcgcgttcgacgaagcg
cgcgcgacctaccgcgcggcggccgcgctgccgaacctcgacgtggtcggcatcgactgc
cacatcggctcgcagatcaccgaactgagcccgtacctcgacgcgatcgacaagctgctc
gatctcgtcgagcagatcgaggcggacggcgtgaagatccaccacgtcgacgtcggcggc
gggctcggcatcacgtacgacgacgaaacgccgcccgacatcggcgcctacgtgcgcgcg
gtgctcgagcgcatcgacgcgcgcggccacggccatcgcgaaatatggttcgagccgggc
cgctcgctgacgggcaacgcgggcattctgctcacgcgcgtcgagttcctgaagcagggc
gacgaaaagaacttcgcgatcgtcgacgcggcgatgaacgatctcgcccgtcccgcgatg
tatgaagcgtttcacgcgatcgagccggtgaagccgcgcacggacatcgcgacggcggtc
tacgacgtcgtcggcccggtctgcgaaagcggcgactggctcggccgcgagcgatcgctc
gcgatcgcgccgggcgatctgctcgcgattcgctccgcgggcgcgtacggcttcacgatg
agctcgaactacaacacgcggccgcgcgcggccgaggtgatcgtcgacggcgcgaacgcg
tatctcgtgcgtccgcgcgaaacggtcgaaagcctgttcgaacgagaatcggtgctgccc
ggcggcaagtga
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