Burkholderia oklahomensis C6786: BG90_2093
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Entry
BG90_2093 CDS
T03861
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
boc
Burkholderia oklahomensis C6786
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boc03016
]
BG90_2093
Enzymes [BR:
boc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BG90_2093
Transfer RNA biogenesis [BR:
boc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BG90_2093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
3HCDH_RFF
Motif
Other DBs
NCBI-ProteinID:
AJX31296
LinkDB
All DBs
Position
I:2297606..2299684
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AA seq
692 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAANELMQQADEA
AQQIDLDFLWECAPAEEFAYATLADEYFGASYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALAALERKRQQALVQAGYEDELKAGKLPDAFAGKALNLLTKPDKNSIEYKA
LDAAALARGVSPARLMLDCGGIPSARALHEARFLAEYFPHGTGFPSITVGKLPDDLPRAD
VGAFSIDDITTTEIDDAFSVEHLTDGRVRIGVHIAAPALGVVRGDAVDAVARARLSTVYM
PGDKITMLPDDVVDVFTLKEGGYRPALSLYIIVKRDTQEIVANETRAEYVYVKSNLRHNT
LDELVTEDALAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLRREVQRNTDYNFYV
EGERVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMPSGPKRTR
MQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQKDADLYA
VVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDEVPLLLHVPAL
GVHARGTRVLLDVMSVDELTIEASVRLLSVLDAPTVSGGEPAEDEEEAEAADDVLLDAAA
ESAESEAEALAEAGGAAGGEGDASANGEEQPK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgaattgccgggcggccggcgcgcgaaggtgcgcgcgaaggac
gtgctgatcgaattcgagaaacccgccgcgaacgagctgatgcagcaggcggacgaggcc
gcgcagcagatcgacctggattttctgtgggaatgcgcgcccgccgaggaattcgcgtac
gcgacgctcgctgacgaatatttcggcgcgagctacggcccggtcgagcgcgcggcgctc
gtgctgcgcctgcacggctcgcccgtctattttcgtcgcaaggggcgcggccagtatcag
cgcgcgcccgaagagcagctgaagatggcgctcgccgcgctggagcgcaagcgccagcag
gcgctcgtgcaggccggctacgaagacgagctgaaggcgggcaagctgcccgacgcgttc
gccggcaaggcgctcaacctcctgacgaagccggacaagaactcgatcgaatacaaggcg
ctcgacgcggcggcgctcgcgcgcggcgtgtcgcccgcgcggctgatgctcgactgcggc
ggcattccgtccgcgcgcgcgctgcacgaagcgcgctttctcgccgagtactttccgcac
ggcacgggctttccgtccatcacggtcggcaagctgcccgacgacctgccgcgtgcggac
gtcggcgcgttctcgatcgacgacatcacgacgaccgagatcgacgatgcgttctcggtc
gagcatctgaccgacgggcgcgtgcggatcggcgtgcacatcgcggcgcccgcgctcggc
gtcgtgcgcggcgacgcggtcgacgcggtcgcgcgcgcgcggctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgttttcacgctgaaggag
ggcggctaccgcccggcgctgtcgctgtacatcatcgtgaagcgcgacacgcaggagatc
gtcgcgaacgagacgcgcgccgaatacgtctacgtgaagagcaacctgcgccacaacacg
ctcgacgagctcgtcaccgaggatgcgctcgcggccggcacgggcgactacccgcacaag
gacgatatcgcggtgctctggccgctcgcgcaggcgctcttcgagaagcgccaggtcgcg
cgcgcgggctacgggctcaggcgcgaagtgcagcgcaataccgattacaacttctacgtc
gaaggcgagcgcgtgacgatcacgccgcgccggcgcggttcgccgctcgatctgatcgtg
tccgagctcgcgatcctcgcgaactcgacgtggggcgcgttcctgcacgaccacagcgtg
ccgggcatctatcgcacgcagcgtgcgttcggcatgccgagcgggccgaagcgcacgcgg
atgcagacgagcgccgcgccgcacgaagggctcggcgtgccgcagtatgcgtggagcacg
tcgccgctgcgccgctacgtcgacctcgtcaatcaatggcaactgctcgcgtgcgtgcag
cacggcgtgaccgcgaagctcgccgcgccgttcaagcagaaggacgcggatctgtacgcg
gtcgtgcagggcttcgacgatacgtatgccgcatacgccgatcatcagcgccggatggag
tatttctggtgcttgcgctggatcaagcaggaaggccgcaagcaggtgagcgcgaccgtc
gtgaagggtgaactcgtgcgtctcgacgaagtgccgctgctgctgcacgtgcccgcgctc
ggcgttcacgcgcgcggcacgcgcgtgctgctcgatgtgatgtcggtcgacgaactgacg
atcgaggcatcggtgcggctcctcagcgtgctcgacgcgccgacggtgtcgggcggcgag
ccggccgaggacgaagaggaggccgaagcggccgacgacgtgctgctcgacgccgccgcc
gaatcggccgaaagcgaagcggaagcgctcgccgaggctggcggcgcggcgggcggcgag
ggcgacgcgtccgcaaacggcgaggagcagccgaaatga
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