Burkholderia oklahomensis C6786: BG90_2517
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Entry
BG90_2517 CDS
T03861
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc03030
DNA replication
boc03430
Mismatch repair
boc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BG90_2517
03430 Mismatch repair
BG90_2517
03440 Homologous recombination
BG90_2517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boc03032
]
BG90_2517
03400 DNA repair and recombination proteins [BR:
boc03400
]
BG90_2517
Enzymes [BR:
boc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BG90_2517
DNA replication proteins [BR:
boc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BG90_2517
DNA repair and recombination proteins [BR:
boc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BG90_2517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJX33640
LinkDB
All DBs
Position
I:2764583..2765809
Genome browser
AA seq
408 aa
AA seq
DB search
MSASPLLHPAIDAPLAFVDLETTGGSAVEHRITEIGVVVVSADHVSTWTTLVNPRQAIPP
FIQQLTGITDDMVRGAPTFADVASALFERLDGKLFVAHNASFDRGFLRAEFERAGFAFNP
DVLCTVRLSRVLFPRESRHGLDALIARHALTPSARHRALADADLIWQFWQKLHDAIPGEH
LREQIERTTRRFRLAGELTEEHLERAPAGCGVYALFGDNDVPLYVGRSVRVRQRLRALLT
GERRSSKEMRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRPDRSAARPAGDAN
WPFDGPVAFEERGASSVFHVVDRWRYVGAASSIEQAAALAAEASEASERGADAAPVVRRI
LQTHLARGLQLIPLAGAARADAQPTALGPPAVQTCDSAVPSASFWPES
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgccgctgctccaccctgcgatcgacgcgccgctcgcgttcgtcgatctc
gaaaccaccggcggctcggccgtcgagcatcgcatcaccgaaatcggcgtcgtcgtcgtg
agcgcggatcacgtgtcgacctggacgacgctcgtcaatccgcggcaggcaatcccgccc
ttcatccagcaactgacaggcatcacggacgacatggtgcgcggcgcgccgacgttcgcc
gacgtcgcgtccgcattgttcgagcgactcgacggcaagctcttcgtggcgcacaacgcg
agcttcgaccgcggttttctgcgcgcggaattcgagcgggcgggttttgcgttcaatccg
gacgtgctctgcacggtgcggctgtcgcgcgtgctctttccgcgcgagtcgcgtcacggg
ctcgacgcgctgatcgcgcgccacgcgctcacgccgtcggcgcgccaccgggcgctcgcc
gatgcggatctcatctggcagttctggcagaaattgcacgacgcgataccgggcgagcac
ctgcgtgagcagatcgagcgcacgacgcgccgtttccggctcgcgggcgagttgacggaa
gagcacctggagcgcgcgccagccggttgcggcgtctatgcgctgttcggcgacaacgat
gtgccgctctacgtgggccgcagcgtccgggtcaggcagcggctgcgcgcgctgctgacg
ggcgagcggcgctcgtcgaaggaaatgcggctggcgcaactggttcggcgcgtcgagtgg
cgcgagacaggcggcgagctcggcgcgctgctggccgaggcggactggattgcttcgctc
gcgccgtcattcaaccggcggcccgaccgcagcgcggcgcgcccggccggcgatgcgaac
tggccgttcgacgggccggttgcgttcgaggagcgcggcgcttcgagcgtcttccacgtg
gtcgaccgatggcgctacgtcggcgccgcatcatcgatcgagcaggccgcggcgcttgcg
gccgaagcgagcgaggcgagcgaacgcggggcggacgccgcgccggtggtgcgccgcatt
ctgcaaacgcatcttgcgcgcgggctgcagctgattccgcttgcgggcgcggcgcgcgcc
gacgctcagccgacggcgcttgggccgcccgccgtgcagacgtgcgacagcgcggtgccg
agtgcgtctttctggccggaatcgtag
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