Burkholderia oklahomensis C6786: BG90_312
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Entry
BG90_312 CDS
T03861
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BG90_312 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boc03400
]
BG90_312 (recB)
Enzymes [BR:
boc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BG90_312 (recB)
DNA repair and recombination proteins [BR:
boc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BG90_312 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
DUF374
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJX31877
LinkDB
All DBs
Position
I:complement(325712..329500)
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AA seq
1262 aa
AA seq
DB search
MSRAAQSGLSTSELDVFACALDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRGRLAQLAHALDTGGDGNDPFVARLFETTLSPERGIDPETAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAHPAFAEWLVEYGAGPAALDAQLARRLKKPLAELRWDGLHTGDDDAEAAAREHFDAAA
GIWRAERGALDALLADAQPSLNQRSHKPEAVAEALDAWARYFEQASAVAALPRAALKLTQ
AALEKATKKGGATPRHAFFDVAQALETAVGAVEAAQRARWLSLVAQWLDTAPAELKQRKR
TRRVVSFDDLLANLHHALEAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVDACNRVFSANARAF
VLDGLDYEPVRAGARARAPLVDTTDPLAGAGDFRVWTLPAGDGGLTKRDAQRQAANACAA
EIARLMRGARERAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAAQGDAEGAARDAS
DDGRARASASATASPSADADAMGWVERFSRYRLLWRERGFAVMWRTFANELRIAERLMAG
QDGERRVTDVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQIV
TVHKSKGLEYAIVFCPFLNDGGLREPSGSGLPDAREYHDEAGSAVLHYGCDDEAAERASR
EAMREQAAERARLVYVALTRAVYRCYLVAGTYVSSRSTKEARRSVLNWLVAGEGRDFDAW
LKEPPEDAELAERWQALAGGPVTLGALPVPAHREPLAAGHETGATQAARRATRGLRDAWR
IASFSSLTSALAREEGGIASVADEETRPDHDALAAAVGTDAPDAAAQAAAAVAHEPAEDD
ILAFPRGAAAGECLHRLFELSDFSDASTWPAAALRALHERPVEAELALAERLPAMMTRLV
ADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDVALEAGALA
GFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPDAYGPRALDAAMAHHAYHLQALLYTVALH
RYLRVRMRDYDYDAHIAGYLYLFVRGVRPGWRSGDAPAGVHARRPARALVEALDALMREG
AA
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgccgcgcaatccggcctgtcgacgagcgagctcgacgtcttcgcgtgcgcg
ctcgacggcgtgaaccagatcgaagcgtcggcgggcaccggcaagacctggaacatctgc
gcgctctacgtgcgcctgctgctcgaaaaggatctcggcgcggacgaaattctcgtcgtc
acctttacgaaggcagcgacggccgagctgcacgagcggattcgcgggcgcctcgcccag
ctcgcgcatgcgctcgacacgggcggcgacggcaacgatccgttcgtcgcgcgcctgttc
gagacgacgctttcgcccgagcgcggcatcgatccggagacggccgcaaagcgcgtgcgg
cgcgcgctgcgcgcgttcgaccaggcggcgatccacacgatccacgcgttctgccagcgc
gcgctgcaggaagcgccgttcgcggcggcgatgccgtttgcgttcgagatggaggcggac
gacggcgcgctgcgcttcgaacttgccgccgatttctggcgtacgcgcgtcgagccggtt
gcggcggcgcatccggccttcgccgagtggctcgtcgaatacggcgcgggtcccgcggcg
ctcgacgcgcaactcgcgcggcggttgaaaaagccgctcgccgagttgcgctgggacgga
ctgcacacgggcgacgacgatgcggaggccgccgcccgcgagcacttcgacgcggcggcc
ggcatctggcgcgccgaacgcggcgcgctcgacgcgctgctcgccgacgcgcagccgtcg
ctgaaccagcgctcgcacaagccggaggcggtggccgaggcgctcgacgcgtgggcgcgc
tacttcgagcaggcgagcgcggtggccgcattgccgcgcgcggcgctcaagctcacgcag
gccgcgcttgaaaaagcgacgaaaaagggcggcgcgacgccgcggcacgcgttcttcgac
gtcgcgcaggcgctcgagacggccgtcggcgcggtcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgcgcaatggctcgacaccgcgcccgccgagctcaagcagcgcaagcgc
acacgtcgcgtcgtgtcgttcgacgatctgctcgcgaacctgcatcacgcactcgaagcg
catccatggctgcgcgagacgttgcgcgcgcgctatccggccgcgctcatcgacgagttc
caggataccgatccgctgcagttcgcgatcttcgacacgatcttcgcgcctgccggcccg
ctctttctcgtcggcgatccgaaacaggcgatctacagcttccgcgcggcggacctgcat
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcgacgcgtgcaaccgcgtgttcagcgcgaatgcccgcgcgttc
gtgctcgacgggctcgattacgagccggtgcgcgccggcgcgcgcgcacgcgcgccgctc
gtcgatacgacggatccgctcgcgggcgcgggcgacttccgtgtatggacgctgcccgcc
ggcgacggcgggttgacgaagcgcgacgcgcagcggcaggcggcgaatgcgtgcgcggcc
gagatcgcgcggctgatgcgcggcgcgcgcgagcgcgcggtgacgctcggcggcgagccg
ctggcggcatcgggcatcgcggtgctcgtgcagacccaccggcagggcagtctcgtgaag
cgcgtgctcgccgcatggggcatcggcagcgtcgagcttgcgcaggcgtcggtgttcgcg
acgatcgacgccgagcagctcgagcgcgtgctcgcggcgatcgacgcgcccggcgacctg
cggcgtctgcgctcggcgctcgcatccgactggttcgggctcgatgcggccgcgctctgg
cgtctcgagcaaggcgacgcggcgcagggcgacgccgagggcgccgcgcgcgatgcctcg
gacgacgggcgcgcgcgcgcatcggcgagcgctaccgcgtcgccttccgcggatgccgac
gcgatgggctgggtcgagcgcttttcccgctatcggctgttgtggcgcgaacgcggcttc
gcggtgatgtggcgcacgttcgcgaacgagctgcggatcgccgagcggctgatggccggc
caggacggcgagcggcgcgtgaccgacgtcaaccatctggccgagctgacgcaggcgcgc
gcctccgcgcagccgggcatcgcgccgacgctgcgctggctcgccgcgcagcggctcgaa
ggcggcggtgacgatgcgcaactgcggctcgagtccgatcgcaacctcgtgcagatcgtc
accgtgcacaagtcgaaggggctcgaatacgcgatcgtgttctgtccgttcctgaacgac
ggcgggttgcgcgagccgagcggctcgggcctgcccgatgcgcgcgagtatcacgacgaa
gcgggcagcgcggtgctgcattacggctgcgacgacgaggcggccgaacgcgcgtcgcgc
gaagcgatgcgcgagcaggcggcggagcgcgcgcggctcgtctacgtcgcgctcacgcgc
gccgtctaccgctgctatctggtcgcgggcacgtatgtgtcgtcgcgctcgacgaaggag
gcgcggcgcagcgtgctgaactggctcgtcgcgggcgagggccgcgatttcgacgcgtgg
ctcaaggagccgcccgaagacgcggagctcgccgagcgctggcaggcgctcgcgggcggc
ccggtgacgctcggcgcgctgcccgtgccggcgcatcgcgagccgctcgcggccggccac
gagacgggagcgacgcaagcggcgcgacgcgcgacgcgcgggctgcgcgacgcctggcga
atcgcgagcttcagttcgctgacgtcggcgctcgcgcgcgaagagggcggtattgcgagc
gtcgccgacgaagagacgcggcccgaccacgacgcgctcgcggccgcggtcggcacggac
gcgcccgacgccgccgcacaagcggcggctgccgtcgcgcacgagcccgccgaagacgac
atccttgcattcccgcgcggcgcggccgcgggcgaatgcctgcaccggctgttcgagctg
agcgatttctccgatgcgtcgacgtggccggcggccgcgctgcgcgcgctgcacgagcgc
ccggtcgaagcggagctcgcgctcgccgagcggctgcccgcgatgatgacgcggctcgtc
gccgatctcgccgcgaccgagctcgtgccgggcatgcgccttgccgcactcgatccggcg
cggcgcctgacggaaatggaattcctgtttcccgcgcccgcactcgatttcaacgcgttg
cggcggctgctcgccgcgcacggctatccggacgtcgcgctcgaagcgggcgcgcttgcc
ggattcgtcaaaggattcatcgacatgatcgtcgagcacgacggccgcttctggatcgtc
gactggaagtcgaatcatctcggcacgacgcccgatgcgtacggcccgcgcgcgctcgac
gccgcgatggcgcaccatgcgtatcacctgcaggcgctgctctatacggtcgcgctgcat
cgctatctgcgcgtgcggatgcgcgactacgactacgacgcgcacatcgccgggtatctg
tatctgttcgtgcgcggcgtgcggcccggctggcgcagcggcgacgcgccggcgggcgtg
cacgcgcgacggccggcgcgtgcgctcgtcgaagcgctcgatgcgctgatgcgcgagggg
gcggcatga
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