Burkholderia oklahomensis C6786: BG90_313
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Entry
BG90_313 CDS
T03861
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BG90_313 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boc03400
]
BG90_313 (recC)
Enzymes [BR:
boc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BG90_313 (recC)
DNA repair and recombination proteins [BR:
boc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BG90_313 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJX33171
LinkDB
All DBs
Position
I:complement(329497..332835)
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AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLDDLAAASDGAGPWAAQQVIVPSAALRRRLELDVAKRHGVCAN
VRFSYLAQWLWAQIGEVLTVPVHSPFAPDRLVWRCYRLLSDDGAAPWRASPRLAAYLAAA
DAPMRHELAHRIATVFDHYLTYRPEWLAQWQEGESIFALEGAPRHGGDAARDDETWQAAL
WRALLAELSDSGMPPAHRFLRDAGSLDLDIVAHAKWPESVSVFALPTMPPLHIALLRELS
RWIDVRIYALNPCREFWFDIVTAARAESLDAADQLDYQEVGHPLLAEWGRQTQAQLHMLH
ELTESAAASDASRYAENPAPTWLARVQNAILELQPEDALGEPPEGRGIEVHVCHSLARQL
EVLHDRLLAWLDADPSLAPSDVLVAMPDLAAAGPLIDAVFGTTSGADAARIPYRITGLPP
SQANPVARVLLDWLALPERNVGAPELIEWLRVDAVAARYGIDAAALETVQTWLAAAGARR
GLAPDAPENANTAVPALRHTFADALTRLFLGYAMPDGAAPVSTWLPISGAEGGEAELLGR
LARFTDDLDGFAQRIAGDLTPQGWGDAFADALARFFDSGPAFADALSGVRDALDAMLAAM
AEGAGGAELPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLIGMDDGV
LPSLTRADEFDLMAVFAKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPP
AALVDELLDHLATVSAGPDAPPDAIDAARRAFVIEHPLQPFSAEYFAPGGTLFTYDASRA
TLARLLAEGAQAAAQPFFSRPLPAEPAEPVAFADFERFWRHPARALLRARLGIALADAQA
ELVDTEPFELDYAGSDALAERVLPLLIETADAAAFEHALRVADASPEVPGGATGAVRRDH
ELDALAQLAGNVRRALADGATRVPFAFEISPAWPAAGDARWFGAHDAELASAATREPLRL
HGALARLTAAGQVIYRYARPGARDYLSAWLAHLVYCTIDPDGPRRTLWFGSGDTFEFAPV
AAPLEQLAPLAALFRAGRRMPLAFFPRSAWALVSESESKAAGVWINDRVAGEADDAALAL
AWRGANPSLDEPFGALAHLVFDPLVEHLRRAS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatcttttctactcgaaccgccacgagacgctagccgacgcgctgctcgacgat
cttgccgccgcgtcggacggcgcggggccgtgggccgcgcagcaggtgatcgtgccgagc
gcggcgctgcgccggcggctcgaactcgacgtcgcgaagcggcacggcgtgtgcgcgaac
gtgcgcttcagctatctcgcgcaatggctgtgggcgcagatcggcgaagtgctgacggtg
cccgtgcattcgccgttcgcgcccgatcgtctcgtgtggcgctgctaccggctgctgtcc
gacgacggcgcggcgccgtggcgcgcgtcgccgcggctcgccgcgtatctggccgcggcc
gatgcgccgatgcgccacgagctcgcgcaccggatcgcgacggttttcgaccactacctg
acgtatcgcccggagtggctcgcgcaatggcaggagggcgaatcgatcttcgcgctcgaa
ggcgcgccgcgccacggcggcgatgccgcgcgcgacgacgagacgtggcaggcggcgctc
tggcgcgcactgctcgccgagctgtccgacagcggaatgccgcctgcgcaccggttcctg
cgcgatgccggctcgctcgatctcgacatcgtcgcgcatgcgaagtggccggaatcggtc
agcgtgttcgcgctgccgacgatgccgcctttgcacatcgcgctgctgcgcgagctgtcg
cgctggatcgacgtgcgcatctacgcgctcaatccgtgccgcgaattctggttcgacatc
gtgaccgccgcgcgcgccgaatcgctcgacgcggcggaccagctcgactatcaggaagtc
ggccatccgcttctcgccgaatggggccggcagacgcaggcgcagcttcacatgctgcac
gagctgaccgagagcgcggcggcgagcgacgcgtcgcgctacgcggagaatcccgcgccg
acgtggctcgcgcgcgtgcagaacgcgatcctcgagctgcagccggaggacgcgctcggc
gagccgcccgaggggcgcggcatcgaggtgcacgtatgccacagcctcgcgcgccagctc
gaggtgctgcacgatcgtctgctcgcgtggctcgacgcggatccgagcctcgcgccgtcg
gacgtgctcgtcgcgatgccggatctcgcggcggcggggccgctgatcgacgcggtgttc
ggcaccacgtcgggcgccgacgcggcgcgcatcccgtatcggatcaccggcctgccgccg
tcgcaggcgaatcccgtcgcacgcgtgctgctcgattggctcgcgctgcccgagcgcaac
gtcggcgcgccggagctgatcgaatggctgcgcgtcgacgcggtcgccgcgcgctacggc
atcgacgcggcggcgctcgagaccgtgcagacgtggctcgcggcggcgggcgcgcgtcgc
gggctcgcgcctgacgcgccggaaaatgcgaacacggccgtgcccgcgctgcgccatacg
ttcgccgatgcgctgacacggctcttcctcggctacgcgatgccggacggcgcggcgccc
gtctccacgtggttgccgatctcgggcgcggaaggcggcgaggccgagctgctcggccgg
cttgcacgcttcaccgacgatctcgacggcttcgcgcagcggattgccggcgacctgacg
ccgcaaggctggggcgacgcgttcgccgacgcgctcgcgcgcttcttcgattcgggcccg
gcattcgccgacgcgctgtccggcgtgcgcgacgcgctcgacgcgatgctcgccgcgatg
gcggaaggcgcgggcggcgccgaattgccggccgctgtcgtgcgcgcgggcctggcggcg
gcactcgacgatccggcgcgcggcggcgtgccgtggggcggcgtcacgttctcgtcgctg
acgagcttgcgcgggctgccgtatcgcgtcgtgtgcctgatcgggatggacgacggcgtg
ctgccgagcctgacgcgcgcggacgaattcgacttgatggccgtgttcgcgaagctcggc
gaccggcagcgccgcgacgacgagcgcaacctgttcctcgatttgctgctcgcggcgcgc
gaccgcctgctgatcgcctatacgggccgcagcattcgcgacaacgcaccgctgccgccc
gcagcgctcgtcgacgaactgctcgaccatctggcgacggtgtcggcggggccggacgcg
ccgcccgacgcgatcgacgccgcgcgccgcgcgttcgtgatcgagcatccgctgcagccg
ttctcggccgagtactttgcaccgggcggcacgctcttcacgtacgacgcgtcgcgcgcg
acgctcgcgcgtctccttgccgagggtgcccaagcggcggcgcagccgtttttctccagg
ccgctgccggccgagcccgcggagcccgtcgccttcgccgatttcgagcgcttctggcgc
catccggcgcgcgcgctgctgcgtgcgcggctcggcatcgcgctcgcggacgcgcaggcg
gagctcgtcgacaccgagccgttcgagctcgattacgcaggcagcgacgcgctcgccgag
cgtgtgctgccgcttctgatcgagacggccgatgcggccgcgttcgagcatgcgctgcgc
gtcgccgacgcgagccccgaagtgccgggcggcgcgacgggcgcggtgcggcgcgatcac
gagctcgacgcgctcgcgcagctcgcgggcaacgtgcggcgcgcgctcgccgacggcgcg
acgcgcgtgccgttcgcattcgaaatctcacccgcctggcccgcggccggcgatgcgcga
tggttcggcgcgcacgatgccgaactcgcgtccgcggcgacgcgcgagccgttgcgcctg
catggcgcgctcgcgcggctgacggcggcggggcaggtgatctaccgctatgctcggccg
ggcgcccgcgactatctgtccgcgtggctcgcgcatctcgtctattgcacgatcgatccc
gacgggccgcgtcgcacgctgtggttcggcagcggcgatacgttcgaattcgcgcccgtc
gccgcgccgctcgagcagcttgcgccgctcgccgcgctgttccgcgcgggccgccggatg
ccgctcgcgtttttcccgaggagcgcatgggcgctcgtgtcggagagcgaatcgaaggcg
gcgggcgtgtggatcaacgatcgcgtcgcgggcgaagcggacgacgcggcgctcgccctc
gcatggcgcggcgcgaatccgtcgctcgacgagccgtttggcgcgctcgcgcatctcgtc
ttcgatccgctcgtcgagcatctgcggagggcgtcatga
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