Burkholderia oklahomensis C6786: BG90_3131
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Entry
BG90_3131 CDS
T03861
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc03030
DNA replication
boc03430
Mismatch repair
boc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BG90_3131 (holB)
03430 Mismatch repair
BG90_3131 (holB)
03440 Homologous recombination
BG90_3131 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boc03032
]
BG90_3131 (holB)
03400 DNA repair and recombination proteins [BR:
boc03400
]
BG90_3131 (holB)
Enzymes [BR:
boc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BG90_3131 (holB)
DNA replication proteins [BR:
boc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BG90_3131 (holB)
DNA repair and recombination proteins [BR:
boc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BG90_3131 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
DNApol3-delta_C
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
AJX31945
LinkDB
All DBs
Position
I:3503336..3504364
Genome browser
AA seq
342 aa
AA seq
DB search
MIYPWQTDDWNRLQALRAHWPHALLLYGQAGIGKLAFARHLAKGFLCETPHESGEPCGAC
AACTWFEQGNHPDYRIVVPEALAGELPGAADEPKAGDADEGGKKTKTPSKEIKIEQVRAL
VDFCGIASHRGGARVVVLYPAEALNVAAANALLKTLEEPSAGVVFLLVSARIDRLLPTIV
SRCRQWPMTVPAPDAAAAWLAAQNVADANALLAEAGGAPLAALALASDENRPLRDWTLAQ
LAAGAACDPFACGETLQKLPVPVVLGWLQRWLYDLLAERAAGAPRYFPAQRAALARCAAA
LDANAFARFQKTVTRQRAVENHPLSARLVFEELFLGYRELFA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatttatccgtggcagaccgacgactggaaccgcctgcaggcgctgcgcgcgcattgg
ccgcacgcgctgctgctatacggccaggcgggaatcggcaagctcgccttcgcgcggcac
ctcgcgaagggcttcctgtgcgagacgccgcacgagagcggcgagccgtgcggcgcgtgc
gccgcatgcacgtggttcgagcagggcaaccatcccgattaccggatcgtcgtgccggag
gcgctcgcgggcgagctgccgggcgcggccgacgagccgaaggccggcgacgccgacgaa
ggcggcaagaagaccaagacgcccagcaaggaaatcaagatcgagcaggtgcgcgcgctc
gtcgacttctgcgggatcgcgtcgcatcgcggcggcgcgcgcgtcgtcgtgctgtatccg
gccgaggcgctcaacgtcgcggccgcgaacgcgctcctgaagacgctcgaggagccgtcc
gcgggcgtcgtgttcctgctcgtgtccgcgcgcatcgaccggctgctgccgacgatcgtg
agccgctgccgccaatggccgatgacggtgcccgcgcccgacgcggccgcggcctggctc
gcggcgcagaacgtcgccgacgccaacgcgctgctcgccgaggcgggcggcgcgccgctc
gccgcgctcgcgctcgcgagcgacgagaaccggccgctgcgcgactggacgctcgcgcag
ctcgcggcgggcgccgcgtgcgatccgttcgcgtgcggcgagacgctgcagaagctgccc
gtgcccgtcgtgctcggctggctgcagcgctggctgtacgatctgctcgccgagcgcgcg
gcgggcgcgccgcgctatttccccgcgcagcgcgcggcgctcgcgcgctgcgcggcggcg
ctcgacgcgaacgcgttcgcgcgtttccagaagacggtcacgcggcagcgcgcggtggag
aaccatccgctcagcgcgcgcctcgtgttcgaggagctgtttctcggctaccgcgagctg
ttcgcgtag
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