Burkholderia oklahomensis C6786: BG90_3213
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Entry
BG90_3213 CDS
T03861
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
boc
Burkholderia oklahomensis C6786
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boc03009
]
BG90_3213 (rumA)
Enzymes [BR:
boc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BG90_3213 (rumA)
Ribosome biogenesis [BR:
boc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BG90_3213 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_ANTKMT
Methyltrans_SAM
Methyltransf_15
Methyltransf_23
MTS
Methyltransf_11
Methyltr_RsmB-F
PCMT
RrnaAD
TRAM
N6_N4_Mtase
Ubie_methyltran
Methyltransf_32
Methyltransf_37
Motif
Other DBs
NCBI-ProteinID:
AJX31059
LinkDB
All DBs
Position
I:3588510..3589907
Genome browser
AA seq
465 aa
AA seq
DB search
MSEAVPLPSRRASNAPAAPDRAPVLDIDSLDMEARGVGRVVDENGEPGKVIFVEGALPGE
RVTYSSFRRKPTYEQAQVVDILRPSVMRTQPKCTFFGTCGGCSMQHLDMRAQVAIKQRVL
EDNLWHLAKLRAEAMFAPIHGPSWGYRYRARLTVRHVAKKGGVLVGFHEKKSSYVADMTS
CEVLPPHVSAMLVPLRRLVEQLSIRDRMPQIELAVGSQVTALVLRVLEPINAADEALLRE
FADTHRVQFWLQPKGPDTVAPFYPLDVRLDYTLPEYGIRMPFKPTDFTQVNHQINRVLVG
RALRLLAPSRGDRVLDLFCGIGNFTLPLARLAREVVGIEGSETLTSRALENAKENGVDGH
TSFACRNLFEVTADDLRALGAFDKVLIDPPREGALAVSKALAEIAQSGVGPLPARIVYVS
CNPSTLARDAGLLVHEAGYRLKGAGVVNMFPHTSHVESIALFERA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaagccgtccctctcccttcgcgccgcgcgtcgaatgcgcccgccgcccccgat
cgcgccccggttctcgatatcgattcgctcgacatggaagcgcgcggcgtcggccgcgtc
gtcgacgaaaacggcgagcccggcaaggtgattttcgtcgaaggcgcgttgcccggcgag
cgcgtcacgtattcgagcttccgccgcaagccgacctacgagcaggcgcaagtcgtcgat
attctgcgcccgagcgtgatgcgcacgcagccgaaatgcacgtttttcggcacctgcggc
ggctgctcgatgcagcatctcgacatgcgcgcgcaggtcgcgatcaagcagcgcgtgctc
gaggacaacctgtggcatctcgcgaagctgcgcgcggaagcgatgttcgcgccgattcac
ggcccgtcgtggggctaccggtatcgggcgcgcctcaccgtgcgccacgtcgcgaagaag
ggcggcgtgctcgtcggcttccacgagaagaagagcagctacgtcgccgacatgacgagc
tgcgaagtgctgccgccgcacgtgtcggcgatgctcgtgccgctgcgccggctcgtcgag
caactgtcgatccgcgaccgcatgccgcagatcgagctcgcggtcggctcgcaggtgacg
gcgctcgtgctgcgcgtgctcgagccgatcaacgcggccgacgaggcgctcttgcgcgaa
ttcgccgacacgcatcgcgtacagttctggctgcagccgaagggaccggatacggtcgcg
ccgttctatccgctcgacgtgcggctcgactacacgctgcccgaatacgggatccggatg
ccgttcaagccgaccgacttcacgcaggtcaatcaccagatcaaccgcgtgctcgtcggc
cgcgcgctgcgcctcctcgcgccctcgcgcggcgatcgcgtgctcgatctgttctgcggg
atcggaaacttcacgctgccgctcgcgcggctcgcgcgcgaggtggtcgggatcgagggc
agcgagacgctgacgtcgcgcgcgctcgagaatgcgaaggaaaacggcgtcgacggccat
acgtcgttcgcatgccgcaacctgttcgaggtcacggccgacgatctgcgcgcactcggc
gcgttcgacaaggtcctgatcgatccgccgcgcgaaggcgcgctcgcggtgtcgaaggcg
ctcgcggagatcgcgcagagcggcgtcgggccgctgcccgcgcggatcgtctacgtgtcg
tgcaatccgtcgacgctcgcgcgggacgcgggtctcctcgtgcacgaggcgggctatcgc
ctgaagggcgcgggtgtcgtcaacatgttcccgcacacgtcgcacgtcgaatcgatcgcg
ctcttcgagcgcgcatga
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