Burkholderia oklahomensis C6786: BG90_5419
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Entry
BG90_5419 CDS
T03861
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BG90_5419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boc03021
]
BG90_5419
Transcription machinery [BR:
boc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BG90_5419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_7
HTH_29
GerE
PhyR_sigma-like
HTH_40
HTH_24
HTH_11
HTH_20
TnsD
Motif
Other DBs
NCBI-ProteinID:
AJX35873
LinkDB
All DBs
Position
II:complement(2122495..2123004)
Genome browser
AA seq
169 aa
AA seq
DB search
MPANTLPLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEP
RAFLTTVAQRVLYNHWRRERLERAYLDALAQLPEAVAPSPETRAILFETLLEIERMLDGL
PAAVKRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaacactctgcctttgcagcgggagatcgctgcgctctacaccggtcatcgc
ggctggctgcacggctggctgtcgaagaagctcggctgcggcgaacgcgcggccgatctc
gtccacgacacgttcatccgcctcctcgcacgcgacgagccgatcgacgcggccgagccg
cgcgcgttcctgacgacggtcgcgcagcgcgtgctgtacaaccactggcggcgcgagcgg
ctcgagcgcgcatatctcgacgcgcttgcgcaattgccggaggcggtcgcgccttcgccg
gagacgcgcgcgatcctgttcgagacgctgctcgagatcgagcgaatgctcgacgggctg
cccgccgcggtcaagcgcgcgttcctgctcgcgcagctcgacgggatgacgcacgcgcag
atcgcggccgagctgcgcgtgtcgctcgcgaccgtcaagcgctacctcgtgaaggcgggc
gcgcagtgctacttcgcgattgccgcatga
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integrated database retrieval system
