Burkholderia oklahomensis C6786: BG90_5568
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Entry
BG90_5568 CDS
T03861
Name
(GenBank) DEAD_2 family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BG90_5568
09124 Replication and repair
03420 Nucleotide excision repair
BG90_5568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boc03021
]
BG90_5568
03036 Chromosome and associated proteins [BR:
boc03036
]
BG90_5568
03400 DNA repair and recombination proteins [BR:
boc03400
]
BG90_5568
Enzymes [BR:
boc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BG90_5568
Transcription machinery [BR:
boc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BG90_5568
Chromosome and associated proteins [BR:
boc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BG90_5568
DNA repair and recombination proteins [BR:
boc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BG90_5568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
AJX34662
LinkDB
All DBs
Position
II:complement(2282961..2285228)
Genome browser
AA seq
755 aa
AA seq
DB search
MSYAVAVRAMCEFTAREGDLDLRFTPAPSALEGIAGHATVASRRGAGYEKEIALAGEHRG
LTVRGRADGYDPVLNRLEEVKTHRGDLGKMPANQRALHWAQARVYGHLLCESRGLAELTV
ALVYFDVGTLRETVLTETHTAAALEACFVGQCERFVDWAAREDAHRAARNAALRALAFPH
ARFRSGQRELAVATYRAARDGRALLAQAPTGIGKTLGTLFPLLKACAEDHLDRLFFLTAK
TPGRALALDAADALRAAAGGALPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAA
ARAAALEHGRLDRATVRAAALAHDVCPYYLAQELARWCDVVVGDYNYYYDGSALLHGLAQ
QNQWRVGVLVDEAHNLLDRARGMYSAALDQRELAGIRKLAPAPLAKALEQLNREWNALDR
EQEAAYVVHADVPPRVLSAAQNLIGRFSELAAEAPLVLEDAVLRFCFDAIRFVALAEQFD
THSIFDATLVRTIAPRRGKKASILCVRNVIPADFLAPRHDAARATVMFSGTLSPFDFYRD
TLGLPDDTGSLDVEGPFRAEQLTVKVAAHVSTRWRDRERSLEPIVELIAAQYAARPGNYL
GFLSSFEYLQQVVARLRERHPELPVWEQAPGMDEAARDAFLARFEPNGRGIGFAVLGGAF
SEGVDLAGDRLIGAFVATLGLPQVNDVNEEMRRAMDARFGRGYDYIYLFPGLRKVVQAAG
RVIRTEHDEGVVHLIDDRFRRGEVRRLLPRWWRLS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgagctatgccgtcgcggtgcgcgcgatgtgcgagttcaccgcgcgcgaaggcgatctc
gatctgcgcttcacacccgcgccgagcgcgctcgaagggattgccgggcatgcgacggtc
gcgtcgcggcgcggcgccggctacgagaaggagatcgcgctcgcgggcgagcatcgcggt
ctgacggtgcgcggccgcgcggacggctacgatccggtgctgaaccgtctcgaagaggtc
aagacgcatcgcggcgatctcggcaagatgccggcgaaccagcgcgcgctgcattgggcg
caggcgcgcgtgtacgggcatctgctgtgcgaatcgcgcgggctcgcggaactgacggtc
gcgctcgtctatttcgacgtgggaacgctgcgcgagacggtgctgaccgaaacgcacacg
gccgcggcgctcgaggcatgcttcgtcgggcagtgcgagcgcttcgtcgactgggcggcg
cgcgaggacgcgcatcgcgccgcgcgcaatgcggcgctgcgcgcgctcgcgtttccgcac
gcgcggtttcggagcgggcagcgcgagctcgccgtcgccacgtatcgcgccgcgcgcgac
ggccgcgcgctgctcgcgcaggcgccgaccggcatcggcaagacgctcggcacgctgttt
ccgctgctgaaggcgtgcgcggaggatcatctcgaccggctgttcttcctgaccgcgaag
acgcccggccgcgcgctcgcgctcgacgcggcggatgcgctgcgcgcggcggcgggcggc
gcgctgccgttgcgcgtgctcgaactcgtcgcgcgcgacaaggcgtgcgagcatccggac
gccgcatgtcacggcgaatcgtgtccgctcgcgcgcggcttctacgaccggctcgccgcc
gcgcgcgccgccgcgctcgaacacggccggctcgatcgcgcgacggtgcgcgccgcggcg
ctcgcgcacgacgtgtgcccgtactatctcgcgcaggagctcgcacgctggtgcgacgtc
gtcgtcggcgactacaactattactacgacggcagcgcgctgctgcacggcctcgcgcag
cagaaccagtggcgcgtcggcgtgctcgtcgacgaggcgcacaatctgctcgaccgcgcc
cgcgggatgtacagcgcggcgctcgatcagcgcgagctcgccgggatccgcaagctcgcg
cccgcgccgctcgcgaaggcgctcgagcaattgaaccgcgaatggaatgcgctcgatcgc
gagcaggaggccgcgtacgtggtgcatgcggacgtgccgccgcgcgtgctgtcggccgcg
cagaacctgatcggccggttttcggagctcgcggcggaagcgccgctcgtgctcgaagac
gccgtgctgcgcttctgcttcgatgcgatccgcttcgtcgcgctcgccgagcagttcgac
acgcattcgatcttcgatgcgacgctcgtgcgcacgattgcacctcgccgcggcaagaag
gcgtcgatcctgtgcgtgcgcaacgtgattccggccgacttcctcgcgccgcgccacgac
gccgcgcgcgcgaccgtgatgttctcgggcacgctgagcccgttcgatttctaccgcgac
acgctcggcctgccggacgacaccggctcgctcgacgtcgaagggccgttccgtgcggag
caactgacggtgaaggtcgccgcgcacgtgtcgacgcgctggcgcgaccgcgagcgctcg
ctcgagccgatcgtcgagctgatcgccgcgcagtacgcggcgcggccgggcaactacctg
ggtttcctgagcagcttcgagtacttgcagcaagtcgtcgcgcggctgcgcgagcgccat
cccgagctgcccgtctgggagcaggcgcccggcatggacgaggccgcgcgcgacgcgttt
ctcgcgcgcttcgagccgaacgggcggggcatcggcttcgcggtgctgggcggcgcgttc
tcggagggcgtcgacctcgcgggcgaccggctgatcggcgcgttcgtcgcgacgctcggg
ctgccgcaggtcaacgacgtcaacgaggagatgcgtcgcgcgatggacgcgcgcttcggc
cgcggctacgactatatttatctgtttccgggattgcgcaaggtcgtgcaggcggcggga
cgggtgatccgcaccgagcacgacgaaggcgtcgtgcatctgatcgacgaccggttccgg
cgcggcgaggtgcggcggctgttgccgcggtggtggcggctgagctga
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