Candidatus Blochmannia ocreatus (nom. nud.): M9405_00445
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Entry
M9405_00445 CDS
T08515
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bocr
Candidatus Blochmannia ocreatus (nom. nud.)
Pathway
bocr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bocr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9405_00445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bocr03019
]
M9405_00445
03009 Ribosome biogenesis [BR:
bocr03009
]
M9405_00445
Enzymes [BR:
bocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M9405_00445
Messenger RNA biogenesis [BR:
bocr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M9405_00445
Ribosome biogenesis [BR:
bocr03009
]
Prokaryotic type
rRNA helicases
M9405_00445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
URJ25192
UniProt:
A0ABY4SV21
LinkDB
All DBs
Position
101097..102785
Genome browser
AA seq
562 aa
AA seq
DB search
MSKTEDSFVSLGLNPNIIDVLHDFGYKKPLPIQTQCIPYLLSGHDVLGMAHTGSGKTAAF
ILPLLHNINIHDIFTQGLIVAPTRELAIQIGKVCINFSKYMKNISSVILYGGQSYNIQLN
ALRKNPHIIICTPGRLIDHLNRGTVNLSKLKTLIIDEADEMLRMGFLEDMEYIIKNIPIQ
RQTALFSATLPISVRKISHKFMRNPKEIYITENTKMCSDIRQNYWLVRGIAKHEALMRFL
ETEDFDAAIVFVKTKNTTLEISKILEQFGYNSAALNGDMDQKIRYQTVNRLICGTLDILI
ATDIAARGLDINRVSLVINYDIPMNSDSYIHRIGRTGRAGRIGKSLLFVERKEYNLLRNI
ERKIHLNIPEIKHPSSKDLITCRLNKFSKKIAHQLHISNDLEIYRSLLTHIKPTKDLTIE
NLAAVLLKMAQGNRPLVFSSNLNSENKTIQITQKIKKYKKHTITSISNKSAKIKLKPKIN
GHMMDIYHISLGSDDGVKKHHIIKVLSNKYYNIHYNKIGNIQLFPDYAIFELNKGLLNNK
NFKRLSRARILNKPINLKFLGT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaccgaagattcttttgtgagtttaggattaaatcctaatataattgatgta
ctacatgattttgggtataaaaaaccattacctatacaaacacaatgtattccgtattta
ttatctggacatgatgttttgggtatggctcatacaggcagtggaaaaactgcagcattt
attttgccattgttacataacataaatattcatgatatttttacgcaaggattaattgtt
gctcctactagagaattagcaatacaaattggaaaagtgtgtattaatttttcaaagtat
atgaaaaacataagtagtgtgattttatatggaggacaaagttataatattcagttaaat
gccttaagaaaaaatcctcatattattatatgtactccaggtagattaatagatcattta
aatcgtggtactgtgaatttatcaaaattaaaaacattaataatagatgaagctgatgag
atgttacgtatgggttttcttgaggatatggaatatattattaaaaatattccaattcaa
cgtcaaactgctttattttctgcaactctacctatcagtgttagaaaaataagtcataag
tttatgaggaatcccaaagaaatatatattactgaaaatactaaaatgtgctctgacatt
agacaaaattattggttggtacggggcattgctaaacatgaagcattaatgagattttta
gaaacagaagattttgatgcagctattgtatttgttaaaactaaaaatacaacattagaa
atttctaaaatattagagcaatttggttataatagtgctgctttaaatggtgatatggac
caaaagataagatatcaaacagtgaatagattaatatgtggtacattagatattcttata
gctacagatatagcagctcgaggtttagatataaatcgtgttagtttggtcataaattat
gatataccaatgaattctgactcttatatacaccgtattggcaggactggtagggcagga
cgtattgggaaatctttattatttgtagaacgtaaagaatataatttattacgtaatatc
gaacgtaaaatacatttaaatattcctgaaattaaacatccttcttctaaagatttaatt
acttgtcgtttaaacaaattttcgaaaaaaatagcacaccagttgcatattagtaatgat
ttagaaatatatcgatctttgctgacacatataaaacctaccaaggatctgactatagaa
aatttagcagctgtattattaaaaatggcgcaaggtaatcgtccattggtattttcatct
aatttaaattctgaaaataaaaccattcaaataacacaaaaaattaaaaaatataaaaaa
catactatcactagtattagtaataaatctgcaaaaattaaattaaaacctaaaattaat
ggacatatgatggatatttatcatatatcattgggcagtgatgatggagtaaaaaaacat
catattattaaggtgctttccaataaatattataatattcattataataaaattggtaac
attcaattatttcctgattatgctatttttgaattaaataaaggcttactaaataataaa
aattttaaacgattatctcgtgctcgtattttaaataaacctataaatttaaaattttta
ggaacttga
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