Candidatus Blochmannia ocreatus (nom. nud.): M9405_01000
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Entry
M9405_01000 CDS
T08515
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bocr
Candidatus Blochmannia ocreatus (nom. nud.)
Pathway
bocr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bocr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M9405_01000 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bocr03021
]
M9405_01000 (rpoA)
03400 DNA repair and recombination proteins [BR:
bocr03400
]
M9405_01000 (rpoA)
Enzymes [BR:
bocr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M9405_01000 (rpoA)
Transcription machinery [BR:
bocr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M9405_01000 (rpoA)
DNA repair and recombination proteins [BR:
bocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M9405_01000 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
URJ25290
UniProt:
A0ABY4SWC3
LinkDB
All DBs
Position
218738..219736
Genome browser
AA seq
332 aa
AA seq
DB search
MPNSFTEFLKPRLVNVEQISKTHSKITLEPLERGFGHTLGNALRRILLSSMPGYAVTEVE
IDGILHEYSTKEGIREDILEILLNLKKLAIKIEGKDNVTLHLNKSGIGTVLANDIICDDS
NIKIITPNHVICHITDDNTSINMHIKVQHGRGYVPASSRFHPDTDNTIPIGRLLLDACYS
PVLRISYTVESARVEQRTDLDKLIIDMETNGTIEPEEAIKRAATILSEQLEAFIDLKDTQ
KPEHQEEKPEFDPILLRLVDDLELTVRSANCLKAESIHYIGDLVQRTEVELLKTPNLGKK
SLTEIKDILAARGLSLGMHLDNWPPKNIADTQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgccaaattcttttacagaatttttaaaaccacgtttagtaaatgttgaacaaattagc
aaaacacattccaaaattacattagagccattagaaagaggctttgggcatacattaggt
aatgctttacgtcgaatattactatcttccatgcctggatacgctgtaacagaagtagaa
atagatggtatattacacgaatatagcactaaagaaggtatacgagaagatattttagaa
attttactaaatttaaagaaattagctattaaaatagaaggaaaagataatgtaacttta
catctaaataaatctggcataggtactgtgttagcaaatgatattatatgtgatgatagt
aatatcaaaattattacaccaaatcacgtaatttgtcatataactgatgacaatacatct
ataaacatgcatattaaagtacaacatgggcgaggttatgtgcctgcttcttctagattt
catcctgacactgataatacgataccgatcggtcggttattattagatgcatgttatagt
ccagttttaagaatttcttatacagtagaatctgctcgggttgaacaacgcaccgattta
gataaactaattattgatatggaaacgaatggcactatagaaccggaagaagctataaag
agagcagctactatcttatcagaacaacttgaagcttttattgacttaaaagatacacaa
aaaccggaacaccaagaagaaaaaccagaatttgacccgatactattaagattagtagat
gatttagaacttacggtacgttctgctaattgcttaaaagcagaatctattcattatatt
ggagatttagtgcaacgcacagaagtcgaacttcttaaaactcctaatttaggaaaaaaa
tctttgacagaaataaaagacatattagctgctcgtggattatcactaggaatgcattta
gataattggcccccaaaaaatattgcagatactcaataa
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