Candidatus Blochmannia ocreatus (nom. nud.): M9405_02865
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Entry
M9405_02865 CDS
T08515
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bocr
Candidatus Blochmannia ocreatus (nom. nud.)
Pathway
bocr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bocr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9405_02865 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bocr03021
]
M9405_02865 (rho)
03019 Messenger RNA biogenesis [BR:
bocr03019
]
M9405_02865 (rho)
Transcription machinery [BR:
bocr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
M9405_02865 (rho)
Messenger RNA biogenesis [BR:
bocr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M9405_02865 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
URJ25057
UniProt:
A0ABY4SUN0
LinkDB
All DBs
Position
complement(661681..662940)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTKLKNTPVSELVHLGESMGLENLARMRKQDIIFAIFKQHAKTGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNDVN
YEKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSISHNYPDCVLIVLLIDERPEEVTEMQRLVNGEVIASTFDEPASRHV
QVSEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTIVPASGKILTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQDELQKIWILRKIIHPMSEIDAMEFMMNKLSMTKTNDEFFNMMKRC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacaaaattaaaaaatacaccagtctctgagctagtccatctaggagaaagt
atggggttagaaaacttagcgcgtatgcgtaaacaagacataatttttgctatttttaaa
caacatgctaaaacaggagaagacatctttggtgatggtgtcttagaaatcttacaagat
ggatttggatttcttagatcaagcgatagttcttatcttgctggacctgatgatatttac
gtatctcccagtcaaataagacgtttcaacttgcgcactggagatactatttctggaaaa
atccgacctccaaaagaaggagagcgttattttgctttactcaaagttaacgatgtaaat
tacgaaaaaccagaaaatgcacgtagtaagattctatttgaaaatctaacacctctgcat
gctaattcaagattacgcatggaacgaggcaatggttctactgaagatctaaccgcaaga
gtattagatttagcgtctcctataggacgtgggcaaagaggattaattgttgctcctcct
aaagccggaaaaaccatattattgcaaaatatagcgcaaagtattagtcataattatcca
gattgtgttttaatagtgttgctgatagatgaacgaccagaagaagtaactgaaatgcaa
cgtttagtaaatggagaagtgattgcatccacttttgatgaaccagcatctcgtcatgta
caagtatctgaaatggtcattgaaaaagcaaaaagattagtagaacacaaaaaagatgtt
attattttgttagattctataactagactagccagagcttataatactattgtacctgcc
tctggaaagatactaacaggtggagtagacgctaatgcgttacatagaccaaaacgtttt
tttggtgccgctcgtaatatggaagaaggaggcagtcttactattatagcaaccgcgtta
attgatactggatcaaaaatggacgaagttatttatgaagaatttaaaggcactggaaat
atggaattgcatttgtcacgaaaaatagctgaaaaacgtgtttttccagcaattgattat
aaccgatctggcactagaaaagaagaactactcacaactcaagacgaactacaaaaaata
tggatcttacgtaaaattattcatccaatgagcgaaatagacgctatggaatttatgatg
aacaaattatctatgactaaaaccaatgacgaatttttcaatatgatgaaaagatgttaa
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