Bactrocera oleae (olive fruit fly): 106614685
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Entry
106614685 CDS
T07646
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bod03041
]
106614685
Enzymes [BR:
bod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106614685
Spliceosome [BR:
bod03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106614685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
R3H
OB_NTP_bind
HA2_C
AAA_22
Ank_2
Ank_5
Ank_4
HA2_N
nSTAND3
AAA_19
Ank
T2SSE
ATPase
NPHP3_N
AAA_16
AAA_11
NRho
Motif
Other DBs
NCBI-GeneID:
106614685
NCBI-ProteinID:
XP_014086043
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MTEDENIAKQMMATRSRNREKNLHKEVNLPEGDRLQLQQRISEFIAGTDVELIIPGLSNA
QRKYVHKYIARLGLLSRSYGSKNNRVLHITHRKRLKLSGCLRKFELSSASRSVLEKLHLY
DAPSSERSHLERRQRLQKKNRIRSEALLGGLGPRLVPPHPNRISNELYRDKKELPIYFYQ
DEINKILKQSPILIISGETGSGKTTQVPQYILNDSTRRNRSCRIVVTQPRRVAAVSVAHR
VAEERGEQIGNTVGYQIRLESRVQKNTNLIYTTSGCLLRSIMTDTNDFFRKISHLVIDEI
HERDKYTDFILITIKDQLRKNKDLKVILMSATMDINLLSKYFENCPVVNVPGQGYNVKIF
HLEDILYRTGYRTALMEKYLRSMNEIDAPKCKEIYTNTDKDECKSNGMQSNINDTHLQLS
LDALIDQCFAENYRCEEELFALFDQIQYFIESEGMPVDMVHSRTGTTALMAASKCNLPKY
LKLFLHHKANVHLVNVEGLTSLDYANMHSDKICMKILQSLDIVHKDQKILNQELNEKQRI
LYAYQKQFNDENEVDHDLILSLIEGLYRSPHPGAIMVFLPGYNDIVQQRDLIQSTLPVNT
FRICILHGQMDSNDQIEALQRHLVRKIILSTNIGQTSITIPDLAYIIDSGKVKMKTHDSI
TESSQLQSVWISKADANQRSGRAGRTQNGVCYRLFSTATYDYMPMFSVPEFMRIPLTEIC
LYAKTLDRQSDVQSYLARSLNPPSNVSVQNAIRKLQILEVFDGDENVTELGRHLVEIPLD
VQLGKCLMYGIFLKCFDSILTIVAYHSVKDPFILPTDRAAQGHASFQRKSFAGKTFSDQL
GILLLYKSYCSVRNNKKRVRDFCSKYFLSHSAMETFCATRRQIADLSAQKFHIGQETSLF
NDDWNIVRCCLVAGFYPNVAVIDREHKTLMSGAEKRLLLQRTSALNPPGMKNFKEFIDQL
PYDWVVFYEKTRVGKTCSINMNTVVSPIVIILHCGKDCLLDEDISDNSEVSDNEELLLES
TEVGSETKINELLNKSVKALSLSEPTAVNNQSAIMSLDHWIKFELPTKDAKMLLQLRVLI
KSQFEAFLRNGHCMQTSTSVYCIQKLLHSLDNIFPT
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagatgaaaatattgcaaagcaaatgatggcgaccagatcccgcaatagagaa
aaaaacctacacaaagaagtaaatttacctgaaggcgaccggttacaattgcaacagcgc
atatcagaattcatagccggtacagatgttgagttgatcattccagggttatccaatgcc
caaaggaaatatgttcataaatatattgctcggcttggactattgtcgcgaagctatggt
tcgaaaaataaccgtgtattacatattacacaccgtaaacgtcttaaattatcaggatgt
ttacgtaaatttgaattgtcgtctgctagtcgatcggtattggagaaattacatttgtat
gacgccccttcaagtgagagaagccaccttgaacgtcggcaacgtctacaaaaaaagaac
cgaattcgtagcgaggcattattaggtggattgggacctcgtcttgtgccaccacatcca
aatcgcatatctaacgaactttatcgagataaaaaggaacttccaatttatttttatcaa
gatgaaataaataaaattttgaaacaaagtcccattttaataattagtggagaaactggt
tcggggaaaaccacacaagtgccacaatatattttaaacgatagtacgcgtagaaatcgg
tcatgtagaatagttgttacacaaccgagacgagtagcagcggtttctgtcgcccataga
gtggcagaagaaagaggtgaacaaatcggaaatactgttggttatcaaatacgtttggaa
agtcgtgttcagaaaaatacaaatttaatctacacaacaagtggttgtctcctacgttct
ataatgactgatacgaacgatttctttcgaaaaatatctcatttagtaatagatgaaatt
cacgaacgagataagtacacagattttatacttataaccattaaagaccaactacggaaa
aataaagatcttaaagttattcttatgtcagctacaatggatataaatttactgtcaaaa
tacttcgaaaattgtccagtggtaaatgtacccggtcagggctataatgtaaaaatattc
caccttgaagacattctttatagaacgggctaccgaaccgctttaatggaaaaatattta
cgctcaatgaacgaaattgacgcaccaaagtgtaaagaaatatatacgaacactgacaaa
gatgagtgtaaatcaaatgggatgcaatcaaatataaatgatacacatttacaactcagt
ctagatgcccttattgatcagtgttttgctgaaaactaccgatgcgaagaggaattgttc
gctttgtttgatcaaattcagtattttattgaaagtgaaggtatgccagtagatatggtg
cattcacgaacaggcacaaccgcacttatggcggctagtaaatgtaatttgccaaaatat
ttgaaactatttctgcatcataaagccaatgtccatctagttaatgttgaaggcttaact
tctctcgattacgcgaacatgcattcggataaaatttgtatgaaaatattgcaaagtcta
gatattgtccataaagatcagaagatattaaaccaggaattgaacgaaaagcaacgtatt
ttatacgcctatcagaagcaatttaatgatgagaatgaagttgatcatgatctgattttg
tcactaatagaaggtctatatcgtagtccccatcctggtgctatcatggtatttttgcca
ggatacaatgatatagtgcaacaaagagatcttattcaaagtacacttccagttaacaca
tttcggatttgcattcttcatggtcagatggattcaaacgatcagatcgaagcactccaa
agacatttagtccgaaaaataatactatctacaaacattggacagacgtcaataacaata
ccagatttagcctacattattgattcgggaaaagttaaaatgaaaacacatgattcaatc
acggaatcgtctcaacttcagtcggtatggatatcaaaggcagacgcaaatcaacggtct
ggacgtgctggtcggactcagaatggtgtttgttatcgattattttctacggcaacatat
gactatatgccaatgtttagtgttcccgaatttatgcgaattccattgaccgaaatttgc
ttgtacgcgaagacgttagatcgtcaaagcgatgtacaatcatatttagctcgttcttta
aaccctccttcaaacgtaagtgtacagaatgctattaggaaactccaaatcttagaagtt
tttgatggagatgaaaacgtgacggagttaggcagacatctagttgaaattcctctggat
gtccagcttggcaagtgcttgatgtatggaatttttttaaaatgttttgattctatattg
actattgtcgcttatcactctgtaaaagatcctttcatcttaccaacagaccgtgcagcc
caaggtcatgcttcattccaacgtaaatcttttgcagggaagacattcagtgatcaactg
ggtattttgttattatataaatcttactgctccgttcgcaacaataaaaaacgtgttcga
gacttctgtagcaaatacttcctgtcacactctgctatggaaacattttgcgcgacgcgg
cgtcaaatagctgacctatcagcccaaaaatttcatataggccaagaaacatctctattc
aatgatgattggaatattgttcgttgctgtttggttgccggcttctatcctaatgtggca
gtaattgatcgtgaacataaaactctaatgtcgggggccgagaaacgattgcttctacaa
cggacatcggcattgaacccaccaggtatgaagaattttaaagaattcattgatcagttg
ccatacgattgggtggtgttctacgaaaaaacacgtgttgggaaaacttgttccataaac
atgaacactgtagtttcacctatagtaattattcttcactgtggcaaagactgtttactg
gatgaagacatatcggacaactctgaagtttcagataacgaagaactccttttagagtct
acagaagttggttcagaaacaaaaataaacgaattattgaataaaagcgtaaaagcactt
tcgttatcagaacctacagcagttaataaccaaagcgctataatgtctttagatcattgg
ataaaatttgaattacctaccaaagacgctaaaatgcttttacaactacgagttctaata
aaatctcaatttgaagcattcttacgaaatggtcattgtatgcaaacatcaacttcagtt
tattgcatacaaaaacttcttcatagcttagataatattttcccaacataa
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