Bactrocera oleae (olive fruit fly): 106614913
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Entry
106614913 CDS
T07646
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106614913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bod03400
]
106614913
DNA repair and recombination proteins [BR:
bod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106614913
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_22
Motif
Other DBs
NCBI-GeneID:
106614913
NCBI-ProteinID:
XP_014086333
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MSKKLNKSGSAGTPNNNLFKYFSRSPRTPNNIPKTPSEEETKKSAAKAEKENLQTGRGNE
DNEPLAKRKLDVGANQSKRKSNAMDVDEDDESIIIKRPTYKRHRIILSDDEEEIKVNKNG
SRKNNSGDDYKPSDEDNTCSSEDDDSPTVAKTHTKKTDEPTQKKPKREKSSFMEKLSALQ
ASATISDAKATAKNDAKYEKIVCTTSTLDEPVVWPHQKLDFLQPDKIKDKNGRRPDHPDY
DPTTLYVPDKYLNSLSPGVRQWWVLKSDNYDCVLFFKVGKFYELYHMDAEVGVQELGFVY
MRGEFAHSGSPEVSFDKMSSILIDRGYKVARVEQTETTEMMSERCKKIKPTKFDKVVRRE
ICQISNRGTQVFGTQCQITPHYQPNYMLAVVEKNEVNSSKYGICYVDTSIGDFYTGEFED
DKNGSRLLTLLSHHMPVLLIFERGSVSERTQEIFRTMLSGILKDPLPANGSKVCSAEKTL
KYLAENYFAKFSEDSTSADLWPLALRTMQSETDHLGLTPRDDCKLALKALGQCILYLQRC
QLEEKVLSMARYHLYTPPDILNESLNDAKGQAVQQKAARRRHMVIDATTLANLRITGEEY
SLQSTLDNCCTKFGKRLLHHWICSPSCELEVIVERQQAITELIEHNMALQDLRALLAPMP
DFERHLAQIHLFGNKRISQDHPDGRAILFEEKLYNKKKIQNFIGILKGFAALMELPTLFN
GFESPLMKRLTQLQPAGGFPDMAKELEFFKNAFDHETSAQTGVIAPEQGVDADYDEALAK
IKNINDTFKDYLIEQEKFFGCRLTPGGEKNRFQLEVPENAARKAGKAYQLEGQRKGNKPV
RRFSTNETRSLLKQLQHAETERDVILKDLSRRIFEKFSKHYELWKQCVDCVANLDVLASL
AEYARAQQVICVPELYEQSADKQPFIDIAEGYHPCAAADTFIPNGLILGTGATTAPLSIL
TGPNMGGKSTLMRQVGLLVVMSQIGAHVPAEHCRISLVDRIFTRLGAQDDIMAGQSTFLV
ELNETSLILKHATVNSLVLLDELGRGTATYDGTAIAASVVNYLADLKCRTLFSTHYHNLI
EYFHKDERITLGHMACMVENEDTEDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQLI
IKRAYALSKRVEAIALKRKVLSKVVAGAGGNKCNDLKEIKNLLLQLKACQV
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaattaaataaaagtggtagtgccggtacgcctaataataatctctttaag
tacttttcgcgttcaccacgaacgccaaataatatacccaaaacacccagtgaggaggaa
accaaaaaatctgcagcaaaagcggagaaggagaacttacaaactggacgtggcaatgaa
gataatgaacctttagctaaacgaaagttagatgttggggctaatcagagcaagcgtaag
agtaatgcaatggatgttgatgaggacgatgaaagtattataattaaacgtccaacttat
aaaagacatcgtataatattgtccgatgatgaagaggaaatcaaagtgaataaaaacgga
agtaggaagaataatagtggcgatgactataagccaagcgacgaggataacacatgtagt
agtgaagacgatgattcgccaacagttgctaaaacccatactaagaaaactgatgaacca
acgcaaaaaaaaccgaaacgggaaaagagtagtttcatggaaaagttatcagctttgcaa
gcctcagcaactatctcagatgccaaagcgactgccaaaaatgatgcaaaatatgagaaa
attgtgtgcacaacgtccacattggacgagccagtagtgtggccacatcaaaagcttgat
tttttgcagccagataaaataaaagataagaatggcagacgccccgaccatccggactat
gatcccactacattgtatgtgccagacaaatacttgaactctttatcccctggtgtgcgc
caatggtgggtcttgaagtcagataactatgattgtgtgctcttctttaaagtgggaaaa
ttctatgagctatatcatatggatgcggaagttggtgtgcaagagctcggtttcgtctat
atgcgtggagaattcgcacattccggttcgccggaagtaagcttcgacaaaatgtctagt
atactcattgaccgcggctataaagtggcacgtgtggaacaaactgaaacaaccgaaatg
atgagcgagcgttgcaaaaagatcaaacctacgaaatttgataaagtggtgcgtcgagaa
atatgtcagatatccaatcgaggtacacaagtctttggaacgcaatgtcagataacacca
cattaccagcccaattacatgttggctgtggtcgaaaagaatgaggtcaactccagtaaa
tatggcatttgttatgtagacacttcaataggcgacttttatactggcgaatttgaagat
gacaaaaacggttcgcgtttattaactttactctcgcatcatatgccagttttgttaatt
tttgaacgtggctctgtttctgagcgaacacaggaaatattccgtaccatgctttccggc
atactcaaagatccattacctgccaatggctcaaaagtatgcagtgctgaaaagacactg
aaatatctcgctgagaattattttgccaaattttcagaagactcaactagtgcagatctt
tggccattagcgttgcgtacaatgcaatccgaaactgatcatttgggtttaacgccgcgt
gatgactgcaagctagcattaaaagcgctgggtcaatgcatattatatttgcaacgttgt
caactagaagaaaaggtgctgtcgatggcacgctaccacctctacactccaccagacata
ttgaatgagtcgttaaatgatgcaaagggacaagcagtgcagcaaaaagccgctcggcgc
cgccatatggtcatagatgctacgacgcttgccaatctacgtattaccggcgaagagtat
tcactacaatctacactagataattgttgtacgaagtttggcaaacgtttgctgcatcat
tggatatgttcgccaagctgtgagttagaggtgattgtcgaacgacaacaagcgattacc
gaactaatagagcacaatatggcgttgcaagatttacgcgctttgttggcgccaatgcct
gatttcgaaagacatctggcgcaaatacatttattcggtaataagcgtatatcgcaagat
cacccggacggacgtgctatactatttgaagagaagttgtataataagaaaaaaatacaa
aactttattggcatattgaagggattcgcagcgctaatggaattgccaacgctttttaac
ggttttgagtcgccacttatgaaacgtttgacgcagttgcagccagctggaggctttcct
gacatggcaaaagaattagaatttttcaagaatgctttcgatcacgagaccagtgcgcaa
accggtgtaattgcacctgaacaaggcgtggacgcagattacgatgaggcattagcgaag
attaaaaacataaatgacaccttcaaggattatcttattgagcaagagaagttctttggc
tgtcgtttaacacctggtggcgaaaagaatcgcttccagcttgaggtgcctgaaaatgca
gctaggaaggcgggtaaagcctaccaattggaaggtcaacggaagggtaacaagcctgtg
agacgcttctcaacgaatgaaacacgttcacttttaaagcaattgcaacatgccgaaacc
gaacgtgatgtcatactaaaagatttatcgcgtcgtatttttgaaaaattctccaaacac
tatgaactctggaagcaatgcgttgattgtgttgccaatcttgatgttttagcctcgttg
gcagagtacgcacgcgcacagcaagtcatctgtgtgcctgagctatacgagcaaagtgcc
gataagcagccgtttatagacattgcagagggttatcatccgtgcgccgctgcggacact
ttcataccgaatgggctcattctaggcaccggtgcgacaacagcaccactttccatacta
acaggcccgaatatgggtggtaagagtacgctaatgcggcaagtgggcttgttagttgta
atgtcacaaatcggcgcgcatgtgccagccgagcattgtcgcatttcgctggtcgatcgt
atttttacacgcttgggtgcgcaggatgacattatggctgggcagagcacatttttggtt
gaactaaatgagacgtcgctgatattgaagcatgcaacggttaacagtttggtgctgctt
gatgaattaggacgtggcacagccacatacgatggtactgctatcgctgcttcggtagtc
aactatctcgcagatttgaaatgtcgtacacttttctccacgcactatcacaatcttatt
gaatatttccataaagacgaacgcataacattgggtcacatggcttgcatggtggaaaac
gaggataccgaagatcccacacaagagacggtgacatttctttacaaatacaccgcaggc
gcatgtcccaagtcgtatggttttaatgccgccaaattggccggcatgccacaactgatt
ataaagcgtgcttatgcgctttctaaacgcgtggaggctatagctttgaaacgtaaagtc
ttgtctaaagttgttgctggcgccggtggcaacaaatgcaacgatcttaaagaaattaaa
aatttacttttgcagctaaaagcttgtcaagtttga
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integrated database retrieval system
