Bactrocera oleae (olive fruit fly): 106616557
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Entry
106616557 CDS
T07646
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106616557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bod03021
]
106616557
03036 Chromosome and associated proteins [BR:
bod03036
]
106616557
Transcription machinery [BR:
bod03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106616557
Chromosome and associated proteins [BR:
bod03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106616557
PBAF complex
106616557
GBAF(ncBAF) complex
106616557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
106616557
NCBI-ProteinID:
XP_014088739
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MNTLGPKKDGSPNVEFFQSPESLQGFETIRLWLQKNCKKYLANNTETITRESLAQLLVQF
LQYVEAKLGKNAQEPPATRIPMRLFMDFKPGGGLCIIFSTMFRFRAEQRGKKFDFSVGKN
PPRKDPNIQLLIDIEQALVEANLYRIHYIYIRPEINKELAQKLRDILSTRRVEIVTDEEE
ATHIIYPVVDPHPDEYARPLFKRGNHVMLHWYYFPESYDSWAINSFDLPEYVPENPELPA
EQCWLVSASWILDLEQYNEWMAEEDYEVDETGKKKTHKHRMSVDDIMSLGTDEKKRMSGG
SGATTKQKRRRSPSPNTSKPGKRKRSPAVLHKKARNEEDDEDLTRDMDDPPAEPNVQEVV
KSSTLQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAVQALSTGDGENSQTGKT
SDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMSEFFNGKNKS
KTPEIFMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDA
ELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKALLDLDKPKINKDGKEVSIE
GDKPALLPGGINIKTEVFENGNNTGQQFGLKLDQYAKKPAAMKNRTAASMTREWTDQETL
LLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFS
KSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGK
FNPSFGLSNTGIAGTGADKEDDEAHTVGTGTATMPVNTGAVDEEMKDVSKKDDNKTHSNE
ANKTEKQNNETESEQKPENDSRNGTENKIEDTNDTDTTSKDPDIVKQQIFNEANVQTAAA
AALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQ
RQQLITERQQFHLEQLKAAEFRARQQAHHRLQLEQQWQGTTGVNAAGNGSLTGNSNATLG
GVSNAPPTQGHPIVSGASSVAAGGSLATNVSSVGSQNATAAVQGGSTQTSIGNTSQPATA
APLTLPATIASSAQQQAPTPMDTITTTSIIPTTGVEGATITGQTILSPPSGSTSVPSANA
QPTGLSPAVPPS
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaatactttaggtccgaaaaaggacggaagtcctaatgtggagttctttcaatcgcca
gaatctctacaaggattcgaaacaatccgcctatggctacagaaaaattgtaaaaaatat
ttagcaaataatactgagacaattacaagagaatcgttggcgcagttattagtacaattc
ctgcaatatgtggaggcgaaattgggtaaaaatgcacaggagccaccggcaacacgtatt
ccgatgcgattatttatggattttaaaccaggtggtggcctatgtatcatctttagtaca
atgtttcgatttcgtgctgaacaacgcggcaaaaaatttgatttttctgtgggaaaaaac
ccaccacgcaaagatccaaacatacaattacttattgatatcgaacaagcactcgtcgag
gcaaatctttaccgtattcattacatatacatacgaccggaaattaacaaagaattagct
cagaagttaagagatatcttaagtaccaggcgcgtggagattgtaaccgacgaagaagaa
gctacacacattatatacccagttgttgatccacatcctgacgaatatgcacgccccctt
ttcaaacgtggtaatcatgtaatgttacattggtattacttcccggaatcttacgactcc
tgggctataaactcatttgatttaccggaatatgtaccagaaaatcctgaactaccagca
gaacaatgctggcttgtctctgcatcttggattttagacctagaacaatataacgaatgg
atggctgaagaagactatgaagtagatgaaacgggaaaaaagaaaacacacaaacatcgt
atgtcggttgatgatataatgtcgttgggcacagatgagaaaaaacgaatgtcgggtggt
agtggcgcaactaccaagcaaaagcggcgccgctcgccttcaccaaatacatccaagcct
ggcaaacgcaaacgctctcctgctgtattacataagaaagcgcgcaatgaagaggatgat
gaagatttgactcgcgatatggatgatccgccggcagagccaaatgtgcaagaggtagtg
aaatcatcaacgctacaatcaactgctagtccagcaccgggaggaaaatctcgtgcagac
aatgacatgatgccgattaaaggaggaaccatgaccgatttggatgacgaaatgacagga
ggaagtgcagttcaggctctatccacgggcgatggtgaaaattcccaaactggcaaaact
agtgataacagtaatacacaagagttctcttcctctgctaaagaagatatggaggacaac
gtaactgagcagacacaccacatcatagtaccctcatactctgcatggtttgattacaac
tcaattcatgtgattgaaaagcgcgccatgtcggaatttttcaatggcaaaaataaatcg
aaaacccctgaaatttttatggcctatcgtaattttatgattgacacctacagattaaat
cctaccgagtacttaaccagcactgcatgtcgcagaaatcttgctggggacgtttgcgct
attatgcgtgtacatgcattcctagagcaatggggtctcataaactatcaaatagacgca
gagctacgaccaactccaatgggaccaccgccaacttctcattttcatatattatcagac
acgccctctggtttgcaatctttgaatccacaaaaaacacaacagccatcagcagcaaaa
gctttgcttgatttggataagccaaaaataaacaaagatggtaaagaagtctcaatagaa
ggagataaaccggcgctgttgccaggtggaataaatattaaaactgaagttttcgagaat
ggtaataacacaggccagcaattcggactgaaactagatcaatatgcaaagaagcctgcg
gcaatgaagaatcgtacagcagcgagtatgacgcgtgagtggacagatcaagaaacattg
cttttgctcgaaggtctcgaaatgcataaagatgattggaataaagtttgtgaacatgta
ggaacgcgtacacaagatgaatgcatactacattttcttcgactacctattgaggaccct
tacttggaggatgatggaggatttttgggtccattaggttgtcaacccataccatttagt
aaatctggtaatccaattatgtcgacggtggcgtttttagcttcagtagttgatcctcgc
gtagcagcagctgctgcaaaggctgccatggaagaattcgccgccataaaggacgaagta
cccgctactataatggataatcatatgaaaaacgtggagaaagcgtcagctggtggaaaa
ttcaatccatctttcggactatccaacaccggcatagccggcaccggggctgacaaagag
gatgacgaggcccatacagtaggaactgggactgcgaccatgccagttaacacaggtgcg
gtagatgaagaaatgaaggatgtttcgaaaaaagacgacaataaaacacattcaaacgag
gctaataagacagagaagcaaaataatgaaacagaatctgaacagaaaccagaaaatgat
tccagaaatggtacagagaataaaattgaagacactaatgacacagatacaacgtcaaaa
gatcctgatatcgtaaagcaacaaattttcaacgaggctaacgttcaaaccgctgcagcc
gcagcattggcttcagcagctgtaaaggccaagcacttagccgccttggaagagcgcaaa
attaaatcgttagtcgcattacttgtggaaacgcaaatgaagaaattagaaataaaacta
cgacattttgaagagctggaaacaacaatggagcgcgaacgtgagggattagagtatcag
cgccaacagcttataaccgaacgccaacaatttcatttggaacaattgaaagctgcagaa
tttcgagcacgtcagcaagcccaccatcgcctacaattagaacagcaatggcaaggaact
actggcgtaaacgccgcaggcaatggttcacttactggtaattctaatgcaacactcggt
ggtgtcagtaatgcaccgcctacgcaaggccatccaatagtgagtggggccagcagcgtg
gccgccggtggatcgcttgcaacaaatgttagtagtgttgggtctcaaaacgcaacagct
gctgttcaaggtggtagcactcaaacatctattggcaacacctcacaaccagctacggct
gcaccgctgactttacctgcaactatcgcttcgtctgcacaacaacaagcgccaactcca
atggatactatcacaactacttctataatccctacaactggcgtagagggagctacaatc
acgggccagacaattttgtcaccgccaagcgggtcaacaagcgtgccatctgcaaatgca
caaccaactggtctctctccagcagtaccaccatcataa
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