Bactrocera oleae (olive fruit fly): 106616769
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Entry
106616769 CDS
T07646
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03013
Nucleocytoplasmic transport
bod03015
mRNA surveillance pathway
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106616769 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
106616769 (Hel25E)
03015 mRNA surveillance pathway
106616769 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106616769 (Hel25E)
03041 Spliceosome [BR:
bod03041
]
106616769 (Hel25E)
Enzymes [BR:
bod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106616769 (Hel25E)
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106616769 (Hel25E)
Spliceosome [BR:
bod03041
]
Complex C
Other components
EJC/TREX
106616769 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106616769 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
MoaE
Motif
Other DBs
NCBI-GeneID:
106616769
NCBI-ProteinID:
XP_036222853
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All DBs
Position
3:complement(15535062..15538114)
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AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAEVPEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPAVKVGVFFGGLSIQKDEESLKGTTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgatgatcttttggattatgaagatgaggagcagaccgaaactaccgtc
gctgaagttccagaagctccaaagaaggatgtgaaaggcacttacgtgtcaattcacagt
tctggcttccgtgactttttgttgaagccggaaattttgcgtgcaatagttgattgcggt
ttcgagcatccgtccgaagtgcaacacgagtgcataccacaggctgtactgggtatggat
atcttatgtcaggctaagtcgggtatgggtaagactgctgtttttgtacttgcgacttta
caacagctggaaccgacagagaatgtggtatacgtattagtcatgtgtcacactcgtgaa
ttagcattccaaataagcaaagagtacgaaagattctcgaagtatatgccggctgtaaag
gttggtgtattcttcggtggattatccatacaaaaagatgaagaatctttgaagggtacg
acacctcacattgttgtaggtacacccggccgtattcttgctttgatacgcaacaaaaaa
ttaaacttgaagcatttgaaacactttattcttgacgaatgtgacaaaatgttggaacaa
ctagatatgcgtcgtgatgtacaggaaattttccgcagcactccacatggaaaacaagtc
atgatgttttccgccacattgagcaaggaaatacgtccagtgtgcaaaaaattcatgcaa
gatcccatggaagtatatgtggatgacgaagcaaaattgacattgcacggactacaacag
cattatgtcaaattgaaggaaaatgagaaaaacaaaaaattgtttgaattattggatgta
ctcgaatttaatcaagttgtaatttttgtaaaatcggtacaacgctgcatggcgctagct
caattgcttactgaacaaaatttccccgcaattggcatacatcgtggtatgactcaagaa
gagcgtttaaaccgttatcaacagtttaaggatttccaaaaacgtattttggtggcaacc
aatctttttggacgtggtatggatatagaacgtgtcaacattgtatttaattatgatatg
ccggaagattctgacacttaccttcatcgtgttgcaagagctggtcgttttggtaccaaa
ggtttggcaataacatttgtttctgatgaagcagacgccaaaattttgaacgaagtgcaa
gaccgattcgatgtcaatatcactgaattaccggatgagatcgatctatcttcatatatt
gagggacgataa
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