Bactrocera oleae (olive fruit fly): 106616811
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Entry
106616811 CDS
T07646
Symbol
Gnf1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03030
DNA replication
bod03410
Base excision repair
bod03420
Nucleotide excision repair
bod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106616811 (Gnf1)
03410 Base excision repair
106616811 (Gnf1)
03420 Nucleotide excision repair
106616811 (Gnf1)
03430 Mismatch repair
106616811 (Gnf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bod03032
]
106616811 (Gnf1)
03400 DNA repair and recombination proteins [BR:
bod03400
]
106616811 (Gnf1)
DNA replication proteins [BR:
bod03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106616811 (Gnf1)
DNA repair and recombination proteins [BR:
bod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106616811 (Gnf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_22
PTCB-BRCT
RuvB_N
AAA_14
nSTAND3
BRCT_2
AAA_30
AAA_33
RCF1-5-like_lid
AAA_16
AAA_18
AAA_5
AAA_7
AAA_17
Motif
Other DBs
NCBI-GeneID:
106616811
NCBI-ProteinID:
XP_014089182
LinkDB
All DBs
Position
2:15917851..15921715
Genome browser
AA seq
1030 aa
AA seq
DB search
MQRDIRTFLKNTATQKKVEPSYDDDDLRNKVRKKRTARVISSDEDEILESPQAKGKTPAK
KKRTDKSPHAIQTQNNKKPSLSKLKSSPSKKLKPVDPTALFGGETLRIEAKKPPPPKIAA
VIELEDDEIDKSLMEVDVDESIRAENDKLGEKRGVRRSKSKTPRKSPHKDKHTPTKLEKS
IDTHTPKKIKQEKEYSVVDKGKKEKITTPKPENKKEKGTPKVKKQLREDLESSVLSDEER
HERKRMSAILYQKYKNRASVINPGSKEVPKGKPNCLAGLTFLVTGILESLERDEAASIIK
ELGGKVMTTVGKRLNYLIVGEEAGPKKLAQAEEFGVNVISEDGLLDLIREKSGDLSKQSV
KEETKLISPKKVKKSVKEKKDIKHIEKVKHESSKKEKKNSDEKLKIHSPKKGIKEEKSPT
KDNKIAVKAEKIETAAVNNGVSEGNVVTKKEIDDTMLPWVDKYKPTSVKEIVGQFGPTSN
VSKLTNWLSKWYINHDGKKKLLKPNPWAKNDDGSFYKAALLSGPPGIGKTTTATLVCKEL
GFDTVEFNASDTRSKRLLKEDVAELLSNKSLFGYFHGQGKTVTKKHVLLMDEVDGMAGNE
DRGGIQELIALIKESSVPIICMCNDRNHQKMRSLVNYCYDLRFNKPRTQQIKGRILSICC
KEGFKIDSDKVDEIIEATNNDIRQSINHISLLSAGKYLKLPTSDKGTNKTAEKDLKMGPW
EVVRKVFSAEEHKHMSLNDKCDLFFQDYSMGPLFVQQNYLQVSPTGSKSDIPSKVASTAD
ALSLGDLVDKRIRSNSAWSLLPTQAIFSSVLPGEYMSGHFTGQINFPGWLGKYSRSNKRS
RLAQEIHDHTRLRTSASRQSIRLDYAPFLLAKIVRPLKELGMEGVEQSLEILKEYHLLRE
DIDSLVELAMWPGKKSLLDEVDGRVKAALTRTYNKEVLAYSYSVHAGVKKKKSEATEETE
LYGMEGEDGGDAPLSDEEEDKIENDGLIKAKKSSATTSSKAKPGSKAKATSSSAASKKST
GKSSTSKAKK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagatataagaacgttcttaaaaaacactgctacgcaaaagaaagttgaaccg
tcgtatgacgatgatgatttacggaataaagtacgcaaaaagcgcactgctcgagttata
tcaagcgacgaagatgaaatactagaaagtccccaagctaaagggaaaactccggcaaag
aaaaagcgaacagataagtcacctcatgctatacaaacacagaacaataagaagccatca
ttgtccaagctgaaaagttcgccttcaaagaaactgaaaccagtcgatcctactgcactt
ttcggtggtgaaaccttacgtatagaggccaagaaaccaccaccaccaaaaatagcagct
gtaatcgaattggaagatgatgaaatcgataagagccttatggaagtagacgtagatgag
agtatacgagcagaaaacgacaaattaggtgaaaagcgaggagtgcgacgctcaaagtcg
aaaacgccgcgaaagagtcctcataaggacaaacatacaccaaccaagttggaaaaatca
atagatacacacacaccaaaaaaaatcaaacaagaaaaagaatattctgttgttgataaa
gggaaaaaagagaagatcacaacacctaaaccggagaacaaaaaggaaaaaggtacaccc
aaggttaaaaaacaacttcgtgaggatttggaaagcagtgtgctctctgatgaagaacgc
catgaacgcaaacgcatgtcagccatactctaccagaagtataaaaacagagctagtgtt
attaatccgggctctaaagaagttccaaagggcaaacctaattgcttagccggactaaca
tttttagtaaccggaatcttagaatcacttgaacgcgacgaggcagcgtcaataattaaa
gagttgggcggtaaagtgatgacaaccgtgggtaaaaggctaaactatttaattgttgga
gaggaagcgggccccaaaaaattggcacaagccgaggaattcggtgtaaatgtcataagt
gaggatggcttattagatcttatacgtgaaaaatccggagacctatcaaagcaatctgtc
aaagaagagacaaagctcataagtcctaagaaagtaaagaaatcagttaaagagaaaaag
gatattaaacatatcgaaaaagtaaaacacgaaagttccaagaaagagaaaaagaatagt
gatgaaaaacttaaaattcattctccaaaaaaaggaattaaagaggagaaatctcctact
aaagataataaaattgcagtaaaagcggagaaaatcgaaactgcagcagtcaataatggt
gtaagcgaaggcaatgtcgtaacaaaaaaggaaattgatgatactatgctgccctgggtc
gacaaatataagccaacaagtgtcaaggaaatagttgggcaattcggaccgacaagtaat
gtttcaaaattaacaaattggctctccaaatggtacatcaaccatgatggcaaaaaaaag
ctactaaagccaaatccttgggctaaaaatgatgatggtagcttttataaagcagcattg
ctatcaggaccgccgggtattggtaaaaccaccacagctacgctggtttgtaaagaattg
ggtttcgacacagtcgagttcaatgcatcagatactcgtagcaagcgacttcttaaggaa
gatgtagcagagcttttgtccaacaaatcgctttttggatattttcatggacaaggcaaa
acggtcacaaagaagcatgtacttttaatggatgaagttgatggaatggctggtaatgaa
gatcgcggtggcatacaggagttaattgctctcattaaagaatcctcagtgccaattata
tgcatgtgtaatgatcgtaaccatcagaaaatgcgttcactcgttaactattgctacgat
ttgcgtttcaataaaccacgtacgcaacagatcaagggacgtattttaagtatttgctgc
aaagaagggtttaaaattgacagcgataaggtggatgaaataattgaagcgaccaataat
gatatacgtcagtcgataaatcacatttcgctattaagtgcaggcaaatatctaaaacta
ccaactagcgataaaggaactaataaaaccgctgagaaagacttgaaaatgggtccatgg
gaggtggtgcgtaaagtattctctgctgaagaacacaaacatatgtcattgaatgacaaa
tgtgatttattctttcaagattacagtatgggaccattatttgttcaacaaaattactta
caagtttcgcccaccggttccaaatcggatattccatccaaggtagccagcacagcagat
gcactaagtttgggtgatttagtggacaaacgcatacgttccaattccgcttggtcgcta
ctgccaactcaagccatcttcagttccgtactaccaggagagtatatgagtggacacttc
accggacaaataaattttcctggttggctaggcaaatattcgcgatcgaacaaacgtagt
cgtctagctcaagagattcatgatcacacacgtttacgaacatctgcatcacgtcagtcc
atacgtctggactatgcaccttttctgttggcgaaaatcgtacgcccacttaaagagttg
ggaatggaaggtgtagagcagtcactggaaatacttaaagaatatcatttgctgcgagaa
gatattgactcgctagtcgaacttgcaatgtggccaggcaaaaagagtttattggatgaa
gtagatggtcgtgtgaaggccgcgttgacacgcacttacaataaagaagtacttgcatac
tcctattcagtacatgctggtgtaaagaagaagaaatctgaagcaaccgaggaaaccgag
ttgtatggcatggaaggggaagatggtggagatgcaccactttcagatgaggaagaggac
aaaatagagaatgatggcttgattaaggcaaaaaagagttcagccacaacttcgtcaaaa
gccaagccgggctcaaaggctaaagcgaccagcagcagtgcagcaagtaagaagtcgaca
ggcaaatcatcaacttctaaggcaaagaaataa
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