Bactrocera oleae (olive fruit fly): 106616974
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Entry
106616974 CDS
T07646
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03013
Nucleocytoplasmic transport
bod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106616974 (Srrm1)
03015 mRNA surveillance pathway
106616974 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106616974 (Srrm1)
03041 Spliceosome [BR:
bod03041
]
106616974 (Srrm1)
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106616974 (Srrm1)
Spliceosome [BR:
bod03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
106616974 (Srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
106616974
NCBI-ProteinID:
XP_069968291
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All DBs
Position
6:complement(40363538..40369537)
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AA seq
1243 aa
AA seq
DB search
MMFTGTTQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIE
DDVVVEFVYNQLEEEKFPCPKKMQINMTGFLNGKNARQFMGELWSLLLSAQESESGIPAE
FIQQKKDEILKREEQQRQNDRSRSRDRDRDRDRDRDNERDRDRDRDRRSGRDRSNDGQRD
EMSQREQQLPPSTLSAIEQVRSQLSAKSRSNSAEETNLGNVSQSKQFEGGNSAGVNAAAA
AAAAALLRDRSRSPNASARSAAAEAAASKIRNRSPRKRSRDRSVMRKSSRERNSSPQRRR
NSPRDRRRPSRSPRRRSSGGDRRRRRSTRSRSRDRSVRRPPSKKRQLSRSNSPQKRQSPK
SKSRRSKDRRSRSRSRSKSPVKRKPSPAAVRNSKNTISSPYRKRSSSRHSNPHTPVNGHE
DGGAAKKRDARKRTPSPNHSESSRVSGVDKRATARKSPKGRSRSRSASKRSVRGAVSSRS
RSRSSSPSSRASERLNKKGVRRSSSRNTSLSPSPEHKEDFEIRRNKNSVQKKRHYRHNRD
SSASSMDREHERDGGRRMMADNRGRRGDMPGRRFSPHNRSPRNDGGGGGRNQRSRSRRRS
KSRNRSRSRNRSRSPMRRSRSPRRFNRRRSPMMHFRGRGGGNNRGRMNFWRRSPSRGRGG
GGGGGVGGPGGRFDRRFSPQRRYSRERDRDRRMSPMQNQFRKFSPQRRFSPPQNMQYQRR
SRERRFSPGPRDRRPSSPMRDNSRDRGGGNNFSRWDQNNRNVQKPKARASSESSNWELDD
EPTKQAANRQPSTTKQTSPIKNNGDRSRSLIRSRDRSGRDSSQSSEKMSKARANSGRRSS
VEYAGPSVKTIDLSKEERGENRKAKMEAIQTESHQVKKQAPLVVATTATTGPTLRNEKLR
DRYSSSLSRTPSPFLKPHEREKLQKNALKKSQEKKPQKSRKESYSSSSESSGDSDDSEDE
EERNIVEKTRVSRMKNSELRTKSKRRKSVTSEDESDDDSDDEQAMKKLNSKGSSKGQIVV
ELPASGKAGRKEKNAHTEEIREERNAVEVGKGKYLNDVSEVTVQSSLKGNKKIVVEKHAP
RDNDSSNSSDDSEKEQSESKTAGSKSKQITSRKRATSVSGLKKSKRESSDSDDDQISKKK
RKKAKKTSKRNSDDDSSSDSEAEAMSKKKKHKKHKKHAKKSKKHKKHKKKNKKADSSSSS
GEEDEVRERIGKSTSASLLLGGVNEDLEKQLRERALKSMKKNE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacgggcaccacccaacagcaggacactcgtttcagcgacaaggagaagaaa
ttaatgaagcaaatgaaatttggagattgcttaaataaacgtgtggatatgtcaaaggtg
aaactagatgtgttgcgcccctggatcagcaaaaaaatcacggatattttacacatcgaa
gacgatgtcgtcgttgaatttgtttacaatcagttggaggaagaaaaatttccgtgccca
aagaaaatgcaaataaatatgacaggatttttaaatggaaaaaatgcacgacagtttatg
ggtgaattatggtctttgttactatctgcacaagagagcgaaagtggaatccctgccgag
tttattcagcaaaagaaagatgagatacttaagagggaagagcaacaacgacaaaatgat
cgttcgcgttcacgcgatagggatagagacagggatcgtgatagggataatgaacgcgat
cgggatcgtgaccgtgacagacgatccggtagagatcgctccaatgatggacaacgtgat
gaaatgagtcaacgtgagcagcagttaccaccaagtacattgagcgcgatcgagcaggtt
aggtcacaattatcagctaaatctagatcgaattcggctgaagaaactaatttaggtaat
gtttcccaaagcaagcaatttgaggggggcaattcagccggtgtgaatgctgcggcagca
gcagcagctgcagctttactgcgcgaccgttccaggtcacccaatgctagtgcaagatct
gcagcagcagaagcggccgcatcaaaaatacgtaatcgatcaccaagaaaacgctccagg
gatagatcagtgatgcgaaaatcatctcgtgaacgcaattcgtcaccgcagagacgacgc
aattctcccagagatagaaggcgaccatcgcgttcaccgaggcgaagatcatctggtgga
gatcgtcgtcgtcgtcgtagcactcgtagtcgttccagggatcgtagtgttagacgacca
ccaagcaagaagcgtcagctatcacgctctaattctccgcaaaaacgtcaaagtccgaaa
tcaaaaagtcgtcgttccaaagatagacgatctagatcaagatcacgttcaaaatcaccc
gtgaaacgaaagccatccccagcggcagtaagaaattccaaaaacacaatttcatctccc
tatcggaagcgttcaagctctcgacactctaacccacacacaccagtcaacgggcatgaa
gacggcggagccgctaaaaagcgcgacgcaagaaagcgtactccctccccgaatcatagt
gaaagctctcgtgtatcaggtgttgacaaaagggccactgcacgcaaatcacctaaaggc
cgttctcgttcaagatccgctagtaaaagatcagtaagaggtgctgtgtcatcacgttca
cgttcaagatcttcatccccttcgtcaagagcttctgagcgtttaaataaaaaaggcgta
cgtcgatctagttcacgaaacaccagtctttcgccatcgcctgagcataaagaggacttc
gaaatacgacgtaacaagaacagcgttcaaaagaagcggcattatcggcataatcgcgat
tcttcagcgagctccatggatagagaacacgagcgggatggtgggcgaaggatgatggcg
gacaatagaggcagacgaggagacatgcctggccgacgattctcaccacataatcgaagt
cctcgaaatgatggtggtggtggcggacgcaatcaacgttctcgatctcgccgccgttca
aaatctcgtaatcgttctagatcacgcaatcgatcacgttctcctatgcgacgttcgcga
tctccccgacgttttaatcgacgtcgatctccaatgatgcactttcgaggtcgaggtgga
ggaaataatcgtggtcgtatgaacttctggcgccgtagtcccagtagaggtcgcggtggt
ggaggaggaggaggtgtaggtggtcctggcggacgctttgatcgtcgtttctcacctcag
cgcagatattcgcgcgaacgagatcgtgatcgccgtatgtcgccgatgcaaaatcaattc
cgcaaattttctccgcaacggcgattctctccaccccaaaatatgcagtaccaaagaagg
tcaagagaacgaagatttagtccaggtccacgtgatcgccgaccatcctctccaatgcgt
gacaattctcgtgatcgaggcggaggaaataatttcagtcggtgggatcaaaataaccgc
aatgttcaaaaaccaaaagctagagcctcgtcagaaagttcgaattgggagttagacgat
gaacctactaaacaagcagcgaaccgtcagcccagcacaacaaaacaaactagtccaatt
aaaaacaacggagaccgttcaagaagtctcatacggtcccgcgatagaagcggtcgggat
tccagccagtcttcggaaaaaatgtcaaaagctcgtgcaaattcaggacgacggtcgtcg
gttgaatatgcaggtccctctgtcaaaaccattgacttatccaaagaagaacgtggcgaa
aatcgtaaagcaaagatggaagcaattcaaactgaatctcaccaagtaaagaagcaagct
ccgctggttgtagccactaccgctactactggtccaactttacgcaacgagaaattacgt
gatcgatacagttcaagtttgtctcgcacaccgtcaccatttttgaagcctcacgaacgt
gaaaaacttcagaaaaatgcgctaaagaaatcgcaggagaaaaagccacaaaagagccgt
aaagaaagttattcctcgtcttcagaaagttccggcgatagtgatgacagtgaagatgag
gaggagcgtaatatagttgaaaaaacaagagtgtcgagaatgaagaattctgaattgcgt
accaaatctaaaagacgaaagtcagtaacaagtgaagacgagtctgacgatgatagcgat
gacgaacaagccatgaaaaagttgaattcaaaaggatcaagcaaaggtcagatagtggta
gaattaccagcaagtggcaaggctgggcgcaaagaaaagaatgcacacaccgaagaaatt
cgagaagagcgaaatgcagttgaggtcggtaaaggcaaatacctaaacgatgtatcagaa
gtaacggttcaaagtagtttgaagggaaataaaaaaatagtggtcgagaaacacgctcca
agagataatgattcatccaattcaagcgatgactccgaaaaagaacagtcggaaagcaaa
acagctggctcgaaatcgaaacaaatcacttcacgcaaacgtgcaacttcggtttctggt
ttgaaaaaatccaagcgcgaatcatcggattcagatgatgaccaaatttcaaagaagaaa
cgaaagaaggcaaagaaaacatcaaaacgtaattcagacgatgatagctcttcggattcc
gaagctgaggcaatgtcaaaaaagaaaaagcataagaagcataaaaaacacgccaagaag
agtaagaaacacaagaaacataagaagaagaacaaaaaggctgatagctcttcaagcagt
ggcgaggaagatgaagtccgcgaacgtatcggaaaatctacatcggcgtctttacttcta
ggaggagtaaatgaagacttagagaaacagttgcgtgaaagggctttaaaatcaatgaaa
aagaacgagtaa
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integrated database retrieval system
