Bactrocera oleae (olive fruit fly): 106617004
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Entry
106617004 CDS
T07646
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106617004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106617004
03041 Spliceosome [BR:
bod03041
]
106617004
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106617004
Spliceosome [BR:
bod03041
]
Complex B
Other components
Prp19-related factors
106617004
Complex C
106617004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
Mad3_BUB1_I
TPR_2
TPR_15
TPR_12
TPR_8
ARM_TT21_C
PPR
ARM_TT21
TPR_10
Motif
Other DBs
NCBI-GeneID:
106617004
NCBI-ProteinID:
XP_014089435
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MTLIDKPLITVDIDFPEEDVPYEEEILRNAYSVKHWLRYIEHKSKAPNCGVNIVYERALK
ELPGSYKIWYNYLRTRRKQVRGRPLNDPMYDEVNNTFERALVFMHKMPRIWMDYGVFMTT
QCRITRTRHVFDRALRALPITQHHRIWPLYLKFVRRFDIPETALRIYRRYLKLFPEDAEE
YIEYLIDVERLDEAAQQLASVVDNEHFVSKHGKSNHQLWNELCDLISKNPDKVHSLNVDA
IIRSGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EEVSLNKRMEMVADDPHATEDDDIDVELRLARFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVKLYEGKPHEIINTYTEAVQTVQPKLAAGKLHTLWVEFAKFYESNNQVEDARVVFERG
TEVEYVKVEDLAAVWCEWAEMEIRQENFEGALRLMQKATAMPKRKVAYHDDTETVQMRLY
RSLKVWSMYADLEESFGTFKTCKAVYDRIIDLKICTPQIIINYGLFLEEHNYFEEAFRGY
EKGIALFKWPNVYDIWNAYLTKFLKRYGGTKLERARDLFEQCLENCPPEHAKYFYLLYAK
LEEEHGLARHAMAVYDRATSAVKPEEMFDMYNIFIKKAAEIYGLPRTREIYEKAIEALPE
ENMRPMCVRFAEMETKLGEIDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLNQPTAGGANAEGGGDAMRLLEAKAAAEQQARQQQT
LKPQTSGNIMFVRGETQGGNAKDKVVNPDEIDIGDSDEDEDDDDNEEAEGDTNGTQKRGS
NEENIISAKRLRIEQQAIPAKVFGSLKKPTDDDDNEQEAD
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgactcttattgataaaccacttattacagtggatatagattttcctgaggaggatgtt
ccctacgaggaggagatattgcgaaatgcttattcggttaaacattggcttcgttacatt
gaacacaaatccaaggcacccaattgtggcgtgaatattgtatatgagcgtgcactcaag
gagctgccgggtagctacaaaatttggtataattacctacgcacacgtcgtaagcaagtg
cgtggacgcccactcaatgatccgatgtatgatgaagtgaacaatactttcgaaagagca
cttgtgttcatgcacaaaatgccacgcatttggatggattatggagtttttatgacgacg
caatgtcgcattacacgtacaagacacgtgtttgatcgcgctttacgtgcattgcccatt
acacagcatcatcgcatttggccgctttatttaaaatttgtgcgacgtttcgatatacca
gaaacagctttacgcatctaccggcgctacctaaaactgtttccggaagatgctgaagag
tatatagagtatttaatagatgtcgagcgtttagatgaagcagctcagcaattggcttca
gtagtggacaatgaacatttcgtatcgaagcatgggaagtctaaccatcagttgtggaat
gagttgtgcgatttgatttcgaaaaatcccgacaaagtgcattcattgaatgtggacgct
attatacggagcggccttagacgttacactgatcagcttggtcatctctggaactctttg
gctgattattatgtacgctcgggtctctttgatcgtgcacgcgatatttatgaagaagct
atacaaacggtgaccacagtgcgcgatttcacgcaagttttcgacgagtatgctcaattt
gaagaggtgtccttgaataaacgcatggaaatggtggctgacgatccccatgccaccgaa
gatgacgacattgatgttgaattgcgcttggcacgcttcgagtatctcatggagcggcgt
ctgctgctattgaatagcgtgctactgcgtcagaatccgcataatgtacatgagtggcac
aagcgtgtaaagttgtacgaaggcaagccgcacgaaataatcaatacatacaccgaagcc
gtgcagactgtgcaaccaaagttggcagcgggcaaactacatacattgtgggtggaattc
gctaaattttacgaatctaataatcaagtagaggacgcgcgggtagtctttgagaggggc
actgaggtggagtatgtaaaagtggaagatctagcggcggtgtggtgtgaatgggcagaa
atggagatcagacaggagaactttgaaggcgctctacgattgatgcaaaaagccactgca
atgccgaaacgtaaagtggcctatcatgatgataccgagacggtgcaaatgcgtttatat
cgctcgctaaaggtctggtccatgtacgccgatttggaggaatcttttggcactttcaaa
acatgcaaagctgtttatgatcgcataattgacttgaaaatctgcacaccgcaaattatc
attaactacgggctcttcttggaggagcacaactacttcgaggaagcttttcgtggctat
gaaaagggcattgcgctcttcaaatggccaaatgtatatgacatatggaatgcttacttg
acaaagtttctcaagcgttatggcggcacaaaattggagcgtgcgcgcgatctgtttgaa
cagtgtctagagaattgtccgcctgagcatgccaagtacttctatttactgtatgcgaag
ttggaggaggaacacggtttagcgcgtcatgctatggccgtctatgatcgggcaaccagc
gctgtcaagcccgaagaaatgtttgacatgtacaacatatttattaagaaagccgcggaa
atctatgggctaccacgtacgcgtgaaatttacgaaaaggccatagaggcattgcccgag
gagaatatgcgtccgatgtgtgtgcgctttgcggaaatggaaacgaagctgggcgagata
gaccgcgcacgcgccatttatgcgcattgctcacaggtatgtgatccacgcataaccgcc
gacttttggcaaacctggaaagagtttgaggtgcgtcatggcaatgaggacactatgcgc
gaaatgttgcgcatcaagcgctccgtgcaggccacctataatacgcaagtgaacatgatg
gccgcacagtttctcaatcagccaactgccggtggcgccaacgctgagggcggtggcgat
gctatgcgtctgctcgaggctaaggcagcggcagagcaacaggcacgccaacaacaaacg
cttaagccacagaccagcggcaatattatgtttgtgcgcggcgaaacgcaaggtggcaac
gccaaggacaaggtggtcaatccagatgaaatcgacattggcgatagcgatgaagacgaa
gacgacgacgataatgaggaggccgagggcgacacaaatggcacacaaaagcgtggcagc
aatgaggaaaacatcatttcggcgaagcgcttgcgcattgaacaacaagcaataccggcg
aaggtgtttggcagtttgaaaaagcccaccgatgatgatgataatgaacaggaagcagat
tga
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