Bactrocera oleae (olive fruit fly): 106617083
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Entry
106617083 CDS
T07646
Symbol
Polr1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106617083 (Polr1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bod03021
]
106617083 (Polr1A)
Enzymes [BR:
bod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106617083 (Polr1A)
Transcription machinery [BR:
bod03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106617083 (Polr1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106617083
NCBI-ProteinID:
XP_014089551
LinkDB
All DBs
Position
2:4856400..4863010
Genome browser
AA seq
1649 aa
AA seq
DB search
MGTTKKLEIDLIPEDLEFGVFSNDEIKRLSVVKIITGLTFDPLGHPLPGGLYDNLMGTYG
RRMEPCGTCYNMQACPGHMGHIELNALVFNPFFIKLVQKMLSIFCLNCFKIQLKAHVCEV
LTLQLRLVDAGYIVEAQELEIFKSEIVCQNEERLVKTEDGKYIHPRIAAMFELLKKGESN
ACNNTKTSCGIRSALVHAALQRVPFKKCIHCEKPLRNIRYLYRKLVYYITAAEMKISMPE
TQQTMGQNKSIFADECRKFLRQIYENYPDLLKLLFPLLKLNASGNESPVDIFFMDTIPVI
PPKARPPNILHNQIVEHPQTGIYRAIIENNSVLRVVMKHIKGLREELTEEAQRVYETTRG
KSSYEKLYNAWQTLQTSVDLLLDITASRDSPSNQGLKQVLEKKEGLIRKHMMGKRVNYAA
RTVITPDPNINVEEVGIPDIFARKLSYPVPVTPWNVTELRKMVMNGPDIHPGANYIQDEK
GYTTLIPADNAAKRESMAKLLFNYPENGIKVVHRHVLNGDVLLLNRQPSLHRPSIMAHKA
RILPGEKTFRLHYSNCKAYNADFDGDEMNAHFPQSEVARAEAYNLVNVASNYLVPKDGTP
LGGLIQDHVISGVKLSIRGRFFNREDYQQLVYQGLSHLREKIKLLPPTILKPTVLWSGKQ
VLSTIIINLIPEGYSRINLHTQAKINSKQWIVSPAHEAACAPLGGSDLCESNVIIHKGEL
LTGVLDKQQYGATTYGLIHCMYELYGGEVSTCLLTAFTKLFTTFLQREGFTLGVQDILVT
AEADAQRQKIVKESRKVGDAAVAAALELDEIPSLDVLVEKMDEAYAKDAKFRVILDRKYK
SALDGYTNDINRTCLPGGLISKFPQNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRP
PLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLSVGYDMTVRDSDNSVVQYLYGEDGLDILKSKFFNTNFCMQFLALNYT
AIIHSNELKNIKDEQTLNKIARHVKKIRKWQNKREERNITHETNRIQSAFTDFSADAPTK
ANALEVNPKNGRSMDYAYKRKLWRKADVETKEQYEKSSARCPDPTTSLYRQDNCYGSISE
RLEKIVDEYMKKYPNSKAAIDDIIYLKNIKALVSPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLREILMLASANIKTPSMDIPIKPSEVKRANKLRIKLNRVTLADIL
QFVNVKTKLVLKPERAYQYKLRFQFLPHEAYQNDLCVRPKKVLKYMGEVFFKLLFRSVIK
SSKSKSSIIDINEEKDGGDKNLDEDESRNEIGGQSKRGKTTSAIEVDSSDDEQANDDDDA
TGRKFKTRKQDETEYDDPEVLEEIKDADDDDEMGDAENDDDVNEDVGKTDAGDAMVEKVL
SNEMVQEYSYDKELHQWCKLTFHLSMKYKKPDISSIIRELAGKCVVHQVQNIKRAIIYKG
DNNTQLLKTDGINIVEIFKYNDILELNRLYSNDIHAIAKTYGIEAAAQVIIKEVTNVFKV
YGITVDRRHLSLIADYMTFDGSFQPLSRKGMEHSSSPLQQMSFESCLQFLKNAAGSGRAD
ELSSPSSRLMVGLPVRNGTGAFELLTKIC
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaacaaaaaaattagaaatcgatttaattcctgaggatttggaattcggagtg
ttctccaatgatgaaataaagaggcttagtgttgttaaaattattactggtttaacattt
gatcctcttggccatcctttgcccggaggcttatatgacaacttaatgggtacatatggt
cgacgaatggaaccatgtggtacttgttataacatgcaggcatgtcctggacatatgggc
catattgagttaaacgcactagtgtttaatcctttctttataaaactagtacagaaaatg
ttaagtattttttgcttaaactgtttcaagatacaactgaaagctcatgtttgtgaagtg
ctgactttgcaattacggctcgtagacgcggggtatattgttgaagcacaagaacttgaa
atatttaaatcggagatagtgtgtcaaaacgaagagcgtttggtgaagactgaagatgga
aaatacatacatcctcggatagcggcaatgtttgagctgttaaagaaaggagagtctaat
gcgtgtaacaatacaaaaacttcatgtggaatacgttcggctctggttcatgctgctctt
caacgtgtcccttttaaaaaatgtatacattgcgaaaaacccttgcgcaacattcgttat
ttgtatcgaaaactagtttactacattacagcagcggaaatgaaaatttctatgccggaa
acacaacagacaatgggtcaaaacaaatcaattttcgctgatgaatgccgaaagtttctg
agacaaatatatgaaaactatccggatttgttaaaactgttatttcctctactgaaatta
aatgcaagtggaaatgaatcgcccgttgatatctttttcatggatactataccagtaata
ccgcctaaagcgcgtccgcccaatatattacataatcagattgtggaacatccacaaaca
ggaatttatagagctataattgaaaacaattcagttctacgagtggtcatgaaacatatt
aaagggctgcgagaggagcttacagaggaggcacaacgtgtatatgaaaccacacgaggc
aaatcatcttatgagaaattatacaatgcttggcaaacgctacaaacttcggtggattta
ttattggacataacagctagcagagattctccatcgaatcaagggcttaaacaagtttta
gagaaaaaagagggcttaatacgcaaacatatgatgggtaagcgcgttaactatgcagcg
cgtactgttattacgcccgatccaaatatcaacgttgaagaagtcggcataccagatatt
tttgctcgcaagttaagctatcctgtgccagtaacaccatggaacgtcactgaactgcga
aaaatggttatgaacggtcccgacattcaccctggcgcaaattatatacaagatgagaaa
ggctacacaacgctcataccagcagataatgcagcaaagcgtgagagcatggcaaaacta
ctattcaattatcctgaaaatggtattaaagtcgtgcaccggcacgttcttaatggtgat
gtgctcctgctcaatcgacagccatcgctacatcgaccatcaataatggcacataaggca
cgaattttgcctggcgaaaagacatttcggctacactattccaattgtaaagcgtacaac
gctgatttcgatggcgatgaaatgaatgcgcatttcccacaaagtgaagtagcaagagca
gaggcttataatttggttaatgtggcaagtaattatttggttcctaaagacggcacacct
ttgggcggcttaattcaggatcatgttatatctggcgtaaaattgtcaattcgtggacgt
tttttcaatagagaagactatcagcaactggtgtatcaaggcctctcacatttacgcgaa
aaaattaaattgctaccaccaacaatacttaaaccgacggtactttggtctggaaaacag
gtcctttcgacaataattattaacttgataccggaaggctactcacgcatcaatctacat
acacaagctaaaatcaattcaaagcaatggatcgtatcaccagcacacgaagcggcttgt
gcacccctgggcggcagcgatttatgtgaaagcaatgttataattcataaaggcgaactg
cttaccggcgtactcgataaacaacaatacggcgcaacaacctacggtttaattcattgc
atgtatgagttgtatggcggtgaggtctccacctgcttgctgacggcgtttacgaaattg
tttacaacatttttgcaacgagaaggatttacgctgggtgtacaagatatattggttaca
gccgaggcggacgcacaaaggcaaaaaatagttaaggaatcacgcaaggttggtgacgct
gcagttgctgctgcattagagttggatgagataccatcgcttgatgtgcttgttgaaaaa
atggatgaggcgtatgcaaaagatgccaaattccgtgttatcttagatcgcaaatataaa
tcggcactcgatggttataccaacgatataaatcgtacttgcttacccggtggcctcata
tccaaatttccacaaaacaatttacaattaatggtgctctccggcgcaaagggatctatg
gtgaacactatgcaaatatcatgtttattgggacaaattgaattggagggtaaacgtcca
ccactcatgatatctggcaagtcattgccgagcttcacatcctttgagacgtcaccgaaa
tcgggtggattcattgacggccgtttcatgaccggcatacagccacaagatttcttcttc
cattgcatggcgggtcgtgaaggtcttattgatactgctgtgaaaacatcgcgttcgggc
tacttgcaacgttgtcttatcaaacatctcgaaggacttagtgttggctatgacatgact
gtgcgcgatagcgacaacagcgttgtacaatatctatatggcgaagatggattagacata
ctcaaatcaaagtttttcaatactaatttctgcatgcaatttttggcgctcaattacaca
gcaatcattcattcaaacgagctgaaaaacatcaaagacgaacagacactcaacaagatt
gcacgacatgtgaagaaaatacgaaaatggcaaaataaacgcgaagaaagaaacataacg
catgaaacgaatagaatacagtcggccttcaccgatttctcagccgatgcaccaaccaaa
gcgaatgcacttgaggtgaaccctaaaaacggacgcagcatggattatgcatacaaacga
aagctttggcgtaaagctgatgtcgaaacaaaagagcaatatgaaaagtcaagcgcgcgt
tgtcccgatcccacaacatctctttacagacaggataattgctacggaagtatttctgag
cgtctagagaaaatcgtcgatgaatatatgaaaaagtatccaaatagtaaagcggcaatt
gacgacataatatacttgaaaaacataaaagcattggtgtcgccgggcgagccagtcggc
ttattagccgcccagtcgattggtgaaccttcgacgcagatgacactgaacactttccat
ttcgccggtcgtggtgaaatgaacgtcacgctcggtataccgcgtctgcgtgaaattctc
atgttagcgtcggctaatatcaaaaccccttcgatggatataccaataaaaccgagtgag
gttaaaagagccaataaactgcgtattaaactgaatcgcgttactttagcggatatattg
caatttgttaatgtgaaaactaaactggttcttaagcctgagcgcgcataccaatacaag
ctacgcttccaattcctgccacatgaagcttatcagaacgatctctgcgtgcgaccaaag
aaggtgctaaaatatatgggtgaggtgttcttcaagctattgttccgttccgttataaag
tcttcaaaaagtaaatcatctatcattgatataaatgaagaaaaagatggcggagataaa
aatttagatgaagatgaatctagaaatgaaataggtggccaatccaagagaggaaaaaca
acgagtgctatcgaagtagattcgtcggatgatgaacaagctaatgatgatgatgacgcg
actggtcgtaaatttaaaacacgtaagcaagatgaaactgagtatgacgatcccgaagtt
ttggaggaaattaaagatgctgatgatgacgatgaaatgggtgatgcagaaaatgatgac
gacgttaatgaagatgtaggaaaaaccgatgcaggtgatgctatggtggaaaaagtgctc
agcaatgagatggttcaagaatattcatatgacaaggagctgcatcagtggtgcaaactt
acgtttcatctaagcatgaaatacaaaaagcctgatatatcatcgattatacgagaattg
gctggtaaatgcgttgtgcatcaagtgcaaaatattaagcgtgctatcatttataaaggc
gacaataatacgcaattattgaaaaccgacggcataaatattgttgagatattcaagtac
aatgatattctagaattaaatcgcctttattccaacgatatacacgctattgccaaaaca
tatggcattgaagcagcggcgcaggtcataattaaggaagtgacaaacgttttcaaagtt
tatggcatcacagtggatagacgacatctctcattaattgccgattatatgacgtttgat
ggtagcttccaaccgctttcacgtaaaggcatggaacactcctcctcaccattgcaacaa
atgtcattcgaatcctgtttgcagtttttgaaaaatgctgctggcagtggacgtgctgat
gagctgagttcaccgtcaagtcggttgatggttggcttaccggtacgaaatggcacaggt
gcctttgagttattaacaaaaatttgttaa
DBGET
integrated database retrieval system
