KEGG   Bactrocera oleae (olive fruit fly): 106617966
Entry
106617966         CDS       T07646                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
bod  Bactrocera oleae (olive fruit fly)
Pathway
bod03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bod00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106617966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bod03019]
    106617966
Messenger RNA biogenesis [BR:bod03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106617966
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 106617966
NCBI-ProteinID: XP_014090936
LinkDB
Position
Unknown
AA seq 271 aa
MAEQHKLIYPVKHFRDFLENEIRLDGRTFDKYRPIGVNIESFQHSLGSSATKIGNSNILC
GIRAELSKPRASAPHAGYIVPNVDMSFTSCSKASSSTNNQNVAEILDCFIYQILNESHCL
NLEDLCIHPGKLVWCLYIDIIGLEVDGGVFDASILACASALSTLKLPKVTYDEKSGKIEI
GDDMKELHLNIFPVVSTYSIFDNVLLVDPTYREESISSAVFHLGVHEDTVGLFHKSGGVP
ISVKEIQQSVKNAVQREKEITSLLNSLKTNQ
NT seq 816 nt   +upstreamnt  +downstreamnt
atggctgaacaacataagttgatatatcccgttaaacattttcgcgattttctcgaaaat
gaaatacgtttggatggccgaacttttgataagtatcggccgatcggtgtaaacattgaa
tcttttcaacactctttggggtcaagtgcaacgaaaattggaaattcgaacattttatgt
ggaatacgggcagagttatccaaaccacgagcgtccgcaccacatgccggttatattgta
cccaatgttgacatgtcattcacatcatgttcaaaagcttcctcatcgacaaataatcaa
aatgtggccgaaatattggactgctttatatatcaaattttaaatgagtcacattgtttg
aatttggaggatttatgcatacatccaggaaagttggtgtggtgcctttatatagatata
attggtttggaagtggatggtggtgtatttgatgcttcaattttagcttgtgcctcagcc
cttagcactctaaaattgcccaaagttacatacgatgagaaaagtggtaaaatagagata
ggcgatgatatgaaggagctacatttaaatatttttcctgttgtcagcacctacagcata
tttgacaatgttctacttgtggatcctacatatcgcgaagaaagtatttcaagtgcggtg
tttcatctcggtgtacacgaagatacagttggactttttcataaaagtggcggagtaccg
atctcagtaaaagaaatacagcaatcggttaaaaatgctgtacagagagaaaaagagatt
acaagcctgctaaatagtttgaaaacaaatcaataa

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