Bactrocera oleae (olive fruit fly): 106618571
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Entry
106618571 CDS
T07646
Name
(RefSeq) collagen alpha-1(IX) chain isoform X2
KO
K08131
collagen type IX alpha
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod04512
ECM-receptor interaction
bod04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106618571
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106618571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bod00535
]
106618571
Proteoglycans [BR:
bod00535
]
Extracellular matrix (ECM) proteoglycans
Others
106618571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106618571
NCBI-ProteinID:
XP_014091841
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MKLFSKILAVMLILGPLPNLAAVSKRQSDLDTYEQFDDDDFVPVSPCSIQRAGDPDLTNY
DIISSYRFDEAHHQYQGVQQIVGSTGYQTAYHFEEYSNMTIESSQAFPKGVPDAFSFECT
FRVPEFDPPNEWFLFEISNYRYESQMSIIMNPLYNALEFSLPKYDGTLQTVTYEELEIFD
HSWHKVMLGVTEDAVRLWVDCKPVPDRSGSLHTPLDVRSPIDSTEGAFTVARDCKTKSTV
PIDLQWMIFSCDVDKPNRATCEDLPQYAKAPKGVSAQESYTTPRATVVPSPIPQRPDLTF
LTTTTYRPALLTSTPVALQGQELHACPEVCPRGPPGQPGPQGPPGRVGAPGQSYSYANQQ
DGRPNIGEKGEPGDIGLPGIPGQDGERGLDGLPGAKGEPGLTGPPGLPGIITADVRNTED
IRNMTVGLPGPKGDSGLPGLNGQKGERGFDGLPGLVGQKGEPGFPGIAGPSGLPGPPGES
GTTNNEVRNIEEREIREICLAVVRDYISEISTTITGPPGPPGRRGYGRPGPPGHPGAQGD
PGVPGPPGERGYPGLPGMQGPQGETGPQGPEGQKGDRGEDGIGLPGPMGLPGTQGPEGRC
VDGLPGRPGEPGAIGTPGQPGAHGPPGQPGVCQDCNAYQAAYAYPLLLAQQQQNNKGPPN
YNNKGPSNYYNKG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaagttattctccaaaatattggcagttatgctcattttgggacctctgcctaatcta
gctgctgtgtcaaagcgtcaaagtgacttggacacttatgagcagtttgatgatgatgac
tttgtgccggtgagcccttgcagcatacaacgagctggtgatccggaccttaccaattat
gatatcatctcttcttatcgcttcgatgaggcgcatcatcaataccaaggcgttcaacaa
attgtcggttcgactggataccaaaccgcgtatcactttgaagagtactccaatatgacg
atcgagtcgtcgcaggcatttcctaaaggtgtacccgacgccttctcatttgaatgcaca
tttcgtgtaccggaattcgatccaccaaatgagtggtttcttttcgaaatctcaaattat
agatacgagtcacagatgagcatcatcatgaatccgctttataatgcgctggaattttca
ttacccaaatatgatggtactttgcagacagttacgtatgaggagctggaaatattcgat
cattcatggcacaaagttatgcttggagttacagaggatgctgtacgcctttgggtcgat
tgcaaacccgtaccggatcgtagtggcagtttgcataccccacttgatgtgcgtagtcca
attgattcgactgagggtgcttttactgtggcacgtgactgcaaaactaaaagcacagtt
cctattgacttgcaatggatgatctttagttgtgatgttgataaacctaatcgtgccacg
tgtgaagatcttccgcaatatgcaaaggcccctaagggagtttcggcacaggagtcatat
accacgccgcgtgcaactgtagtgccgtcgccaataccacagcgcccagatttgacattt
ctaactactaccacttaccgaccggcacttttgacttctactccagttgcgttgcaaggg
caggagttgcatgcatgccctgaagtgtgtccaagagggccacctggacagccaggccca
caaggaccgccgggtcgagtgggtgcaccggggcagtcatattcgtatgccaatcagcaa
gatggtcgtcctaatataggagaaaaaggtgaaccaggtgatattggcttgcctggcata
cccggccaagacggagaacgtggtttggatggtttaccaggtgcaaaaggcgaacccggc
ttaactggaccaccaggtctacctggaattattacagcggacgtacgtaatacagaagat
atacgtaatatgactgtaggcctgcccgggcctaaaggtgatagtggtttaccgggctta
aatggccaaaaaggagaacgtggttttgacgggttgccaggactagtaggtcaaaaggga
gaaccaggttttccgggtatagcaggaccatcaggactacctggacctcccggtgagtct
ggcacaacaaataatgaagtgcgaaatatagaagaacgcgaaatacgtgagatttgtttg
gctgttgtaagagactacataagtgaaatttcaacaacaataactggcccccctggtcca
cctggtcgacgtggttacggtcgccccggaccaccaggacacccaggcgcacaaggtgat
cctggagttccaggaccgccgggtgaacgcggttatcctgggctgccaggtatgcaggga
ccacaaggtgagactggtccgcaaggtccggagggacaaaaaggtgatcgcggcgaagat
ggtattggtctccccggaccaatgggtttacctggtacacaaggtcctgaaggtcgttgt
gtggatggcttgcctggtagacctggtgaacctggtgctattggtacacctggccaacct
ggtgcacacggtcctcctggccagcctggagtttgccaggactgtaatgcctatcaagca
gcttatgcgtatcctctactgctggcacagcaacaacaaaataataaaggtccaccgaac
tacaacaataaagggccatccaattactacaataagggttaa
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