Bactrocera oleae (olive fruit fly): 106618655
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Entry
106618655 CDS
T07646
Name
(RefSeq) polyadenylate-binding protein isoform X1
KO
K13126
polyadenylate-binding protein
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03015
mRNA surveillance pathway
bod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106618655
09123 Folding, sorting and degradation
03018 RNA degradation
106618655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106618655
03041 Spliceosome [BR:
bod03041
]
106618655
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106618655
mRNA cycle factors
Stress granule specific factors
106618655
Spliceosome [BR:
bod03041
]
Complex C
Other components
Complex C specific factors
106618655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
106618655
NCBI-ProteinID:
XP_014091949
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MNSGGPNYQMASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQ
QPADAERALDTMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKSIDNKAIFDTFS
AFGNILSCKVATDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEDFDDEKLKELFEPFGKITSYKVMVKDDGKSKGFGFVAYE
TTEAAEAAVDALNGKDMGEGKVLYVARAQKKAERQQELKRKFEELKKKRQESVFGVNLYV
KNLDDSVDDERLRKEFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTEVNGRV
VGSKPLYVALAQRKEDRKAHLASQYMRHMSGMRMQQLGQIFQPNAAGGFFVPTMAPGQRF
FGPQVTQPIRNTPRWAPQVRPAAGVQGLTQTGAAAAAGSFTNAAAMAATGNAQFRPAAAA
ARGQPQTVQGAHAAAAAANTMRNTGARAITGQQTVTAGNIPMAGAPITAGGAQQRAANYK
YTANMRNPPPQPVQQQPQVQPMHQKGQEKLIASLLANAKPQEQKQILGERLYPMIERMHP
LMAGKITGMLLEIENSELLHMIEDQDALKAKVEEAVAVLQVHRVAEPTN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggaggacccaactatcaaatggcatcactttatgttggcgatttgcaccag
gatattaatgaagctggtttatttgaaaaattttcaaccgctggtccggtattatccatt
cgagtttgccgtgatgtaattacacgtcgttcactgggttatgcctatgtaaatttccag
caaccagccgacgcggaacgcgcgttagatacgatgaattttgatttaattcgtaacaag
cctatacgtattatgtggtcgcaacgggatccttctttgcgtcggtcgggtgtgggaaac
gtctttattaaaaatcttgataaaagtattgacaataaagcgatttttgacactttttct
gcttttggcaacatattgagttgtaaagttgcaaccgacgaaaaaggcaattcaaaagga
tatggttttgtacattttgaaaccgaagaatcggctaacacatcgatagaaaaggtcaat
ggcatgttgttaaatgctaaaaaagtctacgtaggtaaattcattccacgcaaggaacgc
gagaaggaattgggagaaaaagcaaaactgtttaccaatgtgtacgtaaagaattttggc
gaagattttgatgacgagaagttgaaagagttatttgagcctttcgggaaaataaccagc
tataaggtaatggttaaagacgatggcaaaagtaaaggtttcggcttcgtagcctatgaa
accaccgaagcagctgaagccgctgttgacgctttaaatggaaaggatatgggtgagggt
aaggtattatatgttgcccgtgcgcagaagaaagcagaacgccaacaagaactaaaacgc
aagttcgaagaattaaagaagaaacggcaagaatcggtatttggcgttaatttgtatgtt
aaaaacttggatgacagtgtagacgatgaacgactacgcaaagaattttcgatgtatggt
acaattacatctgccaaggttatgactgatgaagagggtcgttctaaaggttttggattt
gtctgcttcatttcgcccaatgaagcaacctgtgccgtcactgaagtgaatggacgtgtt
gtcggttcaaagccattgtatgtagctttggctcaacgtaaagaagaccgtaaagcacat
ttggcatcgcaatacatgcgacacatgtctggcatgcgtatgcagcaattaggtcaaata
ttccaaccaaacgccgcgggcggcttctttgtaccaaccatggcgccaggacaacgtttc
tttggtccacaagtgacccaaccgattcgtaacacaccccgatgggcaccacaggtgcgc
cctgccgctggtgtacaaggcctcacacagactggagctgcagctgctgcaggtagcttc
acaaatgccgccgctatggcagcaaccggtaacgcccagttccgcccagcagcagcggct
gcccgtggccaaccgcagacagttcagggcgcgcacgctgcagcagccgctgccaacaca
atgcgcaatactggcgctcgcgctatcacaggtcagcaaacagttactgcgggcaatata
ccaatggctggagcaccaattactgcaggcggagctcaacaacgcgctgccaattataaa
tataccgccaacatgcgcaatccacctccacaaccggtccaacaacaaccgcaagtgcag
ccaatgcaccaaaagggtcaagagaaactgattgcttctctattggctaatgctaagcca
caggaacaaaaacaaattttaggtgaacgcttgtatcctatgatcgagcgcatgcatcca
ctaatggctggcaagattactggaatgttgttagagattgagaattccgaattgctgcac
atgatagaggatcaagatgctttgaaagctaaagttgaagaagctgttgctgttctgcag
gtccatcgtgttgctgagccaactaattaa
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