Bactrocera oleae (olive fruit fly): 106618746
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Entry
106618746 CDS
T07646
Name
(RefSeq) uncharacterized protein LOC106618746 isoform X3
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106618746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bod03021
]
106618746
03019 Messenger RNA biogenesis [BR:
bod03019
]
106618746
Transcription machinery [BR:
bod03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106618746
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106618746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_C
zf_PCFS4
Pfc11_Clp1_ID
Pcf11_helical
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
106618746
NCBI-ProteinID:
XP_014092087
LinkDB
All DBs
Position
Unknown
AA seq
2124 aa
AA seq
DB search
MDSLKMEISVKTKDENEARVAEEYLSSLSDLTCNSKPLINMLTMLAEENIGCASVIVKVV
EQHIAKVPPDIKLPLLYLIDSIVKNVKSTYIHLFSQCIVNIFCDVFEKVNEKIRERMYAL
RLTWNEVFPSQKLYALDVKVKRIDNNWPITAKQVPPSIHVNPNFLKPNYDLKVQAGDVEE
ILQAKTRELLELKKRKLELELEATKKSLEEQDKQLSKVTNGLMPTEPGTTMGGTRMPGVS
APIMPTGIMAPGLMSQHHMHPRATHPVIVGGGAVPPTALFHTNFNQTRPQQQPQHVPVGM
MSMPPQNFPPTNAGNKPKVHPVNPALLNTIRHRDPRLARQQQMQDATPSMRNSTKSTMSS
SLRGPDDIHKSDNKSSSTSASYRNGGSSNKSSRSDSGGITGAESRRKGSSSRDKDKDKDR
KRSESKSSTSSGSSCSSERQKGSTSSSATGTTSSRNSKKATSNKCDKDAFEIAPLSTTFK
RKSSTTSLSGNESTSSRKKELKRKSHISPTSKNRSRSRSPIDKVSGTSTTVGAGSSGTFS
DRDDRQIFATKKLSKALLADTVHEEELQKNAAALKVENKNKSTAQQPATTVALDSDDEMS
TAAATTTNATAVGATNIMMERKDGNAATTYLKNETSTKHKIVKDDNHDQGVGSGGGGVVS
ASGSLNAKRHNSLDITEQLQSKHKAESLSTDTMEIDKADSDEKKRISTSSTDLEEPLAKK
IKQAKFDALFGDEDVDLRTCIPPQILAVQQLQHKSQQDSKSPTPPPPPFITDEQNAESWN
NLKTSKNTKTTSPTKKASTLDDVRAKLAKATKYSKFNKSEKFSKDITQRVKHSEPQLNDD
SQDANDEKIRTIVAQAQELLETNSINQDQYKNLMQKVMSINETSKLKEAKKRESLEGSAA
TKSKQIEEDEETAEELRAAAAREAVLKKRIPKLRRPSAPTSDNNAISTIPTAELVNSSSA
TTRSPIYEERSNDNSDIGPLQRSKPQREKRLKPTKWGEKVDGAAITATMPGNPNAPKPWT
KGNMLRPHPNIGGFRGGPPPNMPIMHPQMPWQMQMPPGVASGGPPFVNSGPMMRSGVPPP
PQAPMVPIIPLPPNIPKPCNSIDNPQADLVRTITIDGLSKEIRIYDQVAIVFMELDQPRE
IGFQAGQRSIIIDDQPPIALQFNDDYKTFSINGQPHRLRFGFPSRELYIDDQWYEIYFGG
PPVSIPIQNRIHILKAEGPPPQVNIGALRRDLVVGKINMIVDAHIVIPLFLDAKPQSFKL
GNQDHSVQFADNLLTVLLDGEPAKVEYGGLPKSYVLGGISYFIRFGALPQGLKAGQIVVK
DMVYVKTEPPTPEPIQAIAPANQAIDEPLPESTQTDIDNKTEAEKEKEENLMDTADDAKL
QASSNKATDSAEATGAVSEPEVVGTAGSGNSAIPIFSATALNKINIDELFQKLVSSGILG
GAGNVVAPSNKDAGILPSAAALEEEPPQPIAIRPIDLTKSETIKTRQLAIVDTLFSGMQC
SSCGVRFPPEQTIKYSQHLDWHFRQNRRERDLSRKAHSRKWYYDLADWVQYEEIEDLEER
EKNFFEAQQNDVEASDETSNQKWLNSPVALSCPALPADVNRVCDMCQEKFEQFYHEETEE
WHLRNAIRVEDKIYHPLCYEDYKAALNAKVEEADEKAKDKAAEETNTDDDMIIKIEGDDH
SDVEGAKSSDNAIEDDDDDVIVLPNEEPSVTEIDDDDEYVPESVPPIADKDSIDLDTENN
GAESVDADADEDAAGSDVEIQEPHIPFTDLDTYVEKEQIDADETSQMSFLNVKIKEEPKD
DDEDEDDGFEDVGTVLIAPDEEISIQSSEETQTQTITSSTSGMSPTAERPPSSQSLVQVD
TTEFTDGTSTNTVTATPIDLNTSIDGNPGTEDEHNLSTIGPSPAIPLASLVNKIKINIAK
SSITANNSSTSNNSNSNNVGSASATGTTTATTASNMLSSPTKGSTMSDTHTGVDNNDNTN
VGGGENTTQYSHISAISVVSTIPVLCGGGTTGVRTTTLAPVVSSSSSSIKNIAVNEESNV
STISVIGSYGSTSSAPRYFPPSTTSTVVPTVAKRQTAPPPTSTPPPPQEEALTYELKPAL
QNVKLTKTKKVQCGIETSGLCSVM
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atggattcacttaaaatggaaatatctgtgaaaactaaagatgaaaatgaagcacgtgtg
gcagaggaatatctctccagcttgtctgatcttacttgcaacagtaaacccttaataaac
atgctaacaatgttagcagaggaaaatattggatgcgcatcagttatagtgaaagtggtg
gagcaacacatcgctaaggtgccgccagatataaagttgcctttgctatatttaatagat
tctatcgtaaaaaatgttaaaagcacatatattcatctcttcagtcaatgtattgtgaac
atattttgcgatgtattcgaaaaggttaatgaaaaaattcgtgaacgcatgtatgcatta
cggttaacgtggaatgaggttttcccatcacaaaaactttacgcattggatgtaaaagtg
aagcggattgacaataattggccaattacagcaaagcaagtaccaccatctatacatgta
aatccaaattttctcaaacccaattacgatctcaaagtgcaagccggtgatgttgaggag
atattacaagccaaaacacgcgaattgttggaattgaaaaagcgtaaactcgaattagaa
cttgaagcgaccaaaaagagtttagaagaacaagataaacaactgtcaaaagtaacaaac
ggcctcatgccaaccgagccgggcactacaatgggcggcacacgcatgcctggtgtgtca
gcgccaataatgccaactggcataatggcgcccggtttgatgtctcaacaccacatgcac
ccacgggcaacacatccggtgattgtgggcggcggtgcggtgccaccaacagcacttttc
catacgaatttcaatcaaaccaggccacaacaacaaccacagcatgtaccagttggtatg
atgtctatgccgcctcagaattttccgcctacaaatgctggcaacaaaccaaaagtgcat
cctgttaatccagcattattaaacacaataagacaccgtgatccgcgtttggcacgtcaa
caacaaatgcaagatgcgacgccatcaatgcgtaactcaacaaagtccaccatgtcatca
tcattgcgtggccccgatgatatacataaatctgacaataagtcatcttcaacgtcggct
tcgtatcgcaatggtggcagcagcaacaaaagcagtcgcagtgattcgggtggcattacg
ggtgcggaaagtcgacgtaaaggtagctcatcacgtgataaggataaggataaagatcgt
aaacgtagcgaatcaaagagttccacatcatccggtagttcgtgttcctcggagcggcaa
aaaggctccacatccagttctgcaactggaactacaagtagtcgcaacagtaaaaaagca
acgagtaataaatgtgataaagacgcttttgagattgcgccactttctactacattcaag
cgtaaatcctcaaccacatcattatccggcaacgagtcaacgtcgtcaaggaagaaggaa
ctaaaacgcaagtcacacatatcaccaaccagtaagaatcgttcacgcagtcgttcgcca
attgataaagttagcggtacgagcacaacagttggcgccggcagtagcggcactttctcg
gatcgcgatgaccgacaaatatttgcaacaaagaaactgtcgaaagcattactcgctgat
accgtgcacgaggaggagttgcagaaaaatgccgccgcattaaaagtagaaaacaaaaac
aaatctacagcgcaacaaccggcgaccactgttgctcttgactccgacgacgagatgtca
acagcagcagcaacaacaacaaacgcaacagcagtaggagcgacaaacataatgatggaa
cgaaaagatggcaatgcagcaacaacatacttgaaaaatgaaacttctactaaacataaa
attgttaaagacgataatcatgatcaaggtgttggtagtggtggtggtggtgttgttagt
gctagcggtagtcttaatgctaagcgtcacaacagtcttgacattacggaacagctacaa
agcaagcataaggcggagtcactgtccacagatacaatggaaattgataaagccgatagc
gatgagaagaaacgtatatccacatcaagtacggaccttgaagaaccactggccaagaag
attaaacaagccaaattcgatgccttatttggtgacgaagatgtagatttacgtacttgt
ataccgccgcaaatactagccgtacaacagctacaacataaatcacaacaagatagtaag
tcgccaacaccaccgcctccgccatttataacagatgaacagaatgcggagagttggaat
aacttgaagacttcaaaaaatacaaaaacaacatcgcctacgaagaaagcatcgaccttg
gatgacgtgcgtgcgaaactggcgaaagcaactaaatacagcaaatttaataaatcagaa
aagtttagtaaagatattacccagcgtgttaaacattcagagccacaattgaacgacgac
tcacaggatgctaacgacgaaaaaatacgtacaattgtagcacaggcacaagagctgctc
gaaaccaactccatcaatcaggatcaatataagaatctcatgcagaaagtaatgtccata
aatgagacgagcaaattgaaggaggcaaagaaacgtgaatcgctcgaaggcagtgctgca
acgaaatccaagcaaattgaagaggacgaagaaacggccgaagaactacgcgccgcagcg
gcacgtgaagctgttttgaagaaacgtataccgaaattgcgtaggccctcagcaccaacc
agcgacaataatgccattagtaccattcctaccgctgaactagtcaatagcagttctgca
acaacacgttcgcccatttatgaagagcgcagcaatgacaatagcgatataggtccgtta
cagcgttccaaaccgcagcgagaaaaacgcttaaaaccaacaaaatggggtgaaaaagtg
gatggcgccgctatcacagctactatgccgggcaatccaaatgcgcctaaaccatggacg
aagggtaatatgctgcgcccacatcctaatatcggcggcttccgcggtggaccaccgcca
aatatgcccatcatgcatccgcaaatgccttggcaaatgcaaatgccgcctggtgttgcg
tccggcggtccgccattcgtgaattctggtccaatgatgcgtagcggtgtaccgccgcca
ccgcaagcaccaatggtgccgattataccactaccacccaacataccaaaaccgtgcaac
tcaatcgataatccgcaagccgatctggtgcgtactatcactatcgatggcctctcgaaa
gagatacgcatttacgatcaggtagccattgtgttcatggaattggatcagccacgtgaa
atcggttttcaggcgggtcaacgttcgatcatcattgatgatcagccaccaatagcgttg
caattcaatgacgattataaaactttcagcattaacggccagccacatcgtttacgtttc
ggctttccgtcgcgcgaactgtacattgacgatcagtggtatgagatatatttcggtgga
ccacccgtctcaattcccatacaaaatagaatacatatacttaaagctgaaggaccgcca
ccacaagtgaatatcggtgcgctgcgtcgagatttggttgtcggtaagatcaatatgatt
gttgatgcacacattgtcataccattgttcctggatgcgaaaccgcaaagctttaaattg
ggaaatcaagatcacagtgtacaatttgctgacaacttattgacagttttgctggatggc
gagcctgccaaagtggagtatggcggtttgccgaagagctacgtgctgggcggtataagt
tatttcatacgcttcggagctttgccgcaaggcttgaaagccggacaaatcgtagttaag
gatatggtttatgttaaaaccgaaccaccaacaccggagccaatacaagcaatcgcgcca
gccaatcaggcaattgatgaaccgctacctgagagtacacaaacagatattgataataag
actgaggcagaaaaagaaaaggaggaaaatcttatggacacagccgatgatgctaaattg
caggcgtcgtcaaacaaagcaaccgacagtgcagaagcaacgggtgcggttagtgaacct
gaagtcgttggtacagccggcagtggcaattcggcaataccgatattctctgcaactgca
ttaaacaaaattaatatcgacgagctgttccagaaattagtctcctctggcattttgggt
ggcgctggcaatgttgtagcacctagtaacaaagatgccggtattctgccatcagctgct
gcacttgaagaggagccaccacaaccgattgctatacgcccaatcgacctgaccaaatcg
gaaacgattaaaacacgccaattggcaattgtggatacattattctccggcatgcaatgc
agcagttgtggtgtgcgctttccaccagagcaaactatcaagtatagtcaacatttagat
tggcatttccgacagaatcgacgcgaacgagacctatcacggaaagcgcattcgcgtaaa
tggtattatgatctagccgactgggtgcaatatgaggaaattgaggatttagaagaacgt
gagaagaacttttttgaggcgcaacaaaatgatgtcgaagcatcggacgagacgtcaaat
caaaagtggctcaattcaccggtagcacttagttgtccggctttgccagcagatgtcaat
cgtgtctgcgatatgtgtcaagagaagttcgaacaattttatcatgaggaaactgaggaa
tggcatttacgcaatgcgatacgcgtggaagataaaatatatcatccgttatgctacgaa
gattacaaggctgccctgaatgctaaagttgaagaagccgatgaaaaggcaaaagacaag
gctgcagaggaaacaaataccgatgatgatatgattatcaaaattgaaggcgatgatcat
agcgatgttgaaggtgcaaaatcatcagacaatgcaatagaagatgacgacgatgatgtt
atcgtattgcctaatgaggaaccctctgtaacagaaattgacgatgatgatgaatatgta
ccggaaagtgtaccaccaatcgcagataaagattccattgaccttgacactgagaataac
ggcgcagaatcagtagacgcagatgcagatgaggatgccgctggatcagatgtggaaata
caagagccgcacattccattcacagacttggatacatatgtggaaaaggaacaaatagat
gccgacgaaacatcacaaatgtcattcttaaatgtgaaaattaaagaagaaccaaaagat
gacgatgaggatgaagatgacggttttgaggatgttggcactgtgctaatagcaccagat
gaagagatctccatacaaagcagtgaagaaacacaaactcaaacaattacgtcatcgacg
tcgggcatgtcgcctactgccgaacggccaccctcctctcaatcacttgttcaagtcgat
acaacggaatttactgatggaactagtaccaatacagtaaccgcaacgccgattgacttg
aatacctcgattgatggcaatcccggcaccgaagacgaacataatttatccacaattggt
ccatcacctgcgataccattggctagcttagttaataaaattaaaataaatatagctaag
agtagtataacagcaaataatagtagtactagtaataatagtaatagtaataatgttggt
agcgcctctgcgacaggcacaacaactgcaacgacagccagcaatatgctgagcagtcca
accaaaggctcaacgatgtctgatacgcatacaggcgttgataataatgacaacactaac
gttggtggtggtgaaaatacaacgcaatatagccacatatcagccataagtgttgtatcc
acaataccggtactttgtggcggcggtacgaccggcgtacgtaccactaccctagcgccg
gtggtgtcgagcagcagtagcagtataaaaaatatagctgtcaatgaagagtccaatgta
agtacgatatctgtcattggcagctatggcagtacatcctcagcgccgcgttatttcccg
ccatcaactaccagcacagttgtgccgactgttgcgaagcggcaaacagcaccaccgcca
acgtcaacgccaccgccgccacaagaggaagcgttaacatacgaattgaaaccggctttg
cagaatgtcaagctcacaaaaacgaaaaaagtacaatgcggcatcgagacatcggggctc
tgttcagttatgtaa
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