Bactrocera oleae (olive fruit fly): 106618764
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Entry
106618764 CDS
T07646
Name
(RefSeq) DNA repair protein RAD50 isoform X2
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03440
Homologous recombination
bod03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106618764
03450 Non-homologous end-joining
106618764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bod03032
]
106618764
03400 DNA repair and recombination proteins [BR:
bod03400
]
106618764
DNA replication proteins [BR:
bod03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106618764
DNA repair and recombination proteins [BR:
bod03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106618764
BRCA1-C complex
106618764
NHEJ (non-homologous end-joining)
MRX complex
106618764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
AAA_16
AAA_22
YdjO
Phospholip_B
Motif
Other DBs
NCBI-GeneID:
106618764
NCBI-ProteinID:
XP_014092122
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MSTIEKLSIQGIRSFGSNSEDVQTITFSSPVTLILGENGCGKTTIIECLKYGLTGEVPPG
GDHGRSFVHDPKIFNQAGTLGQIKLEVSNLQGKRLSVCRSMKISNKRGKYSFETLDATMN
YIDDKADGKGSTNSISKRCVDVDVAMCQFMGVSKAIINNVLFCHQENSSWPLDESKKLKD
KFDAIFGITEFNKTIERIIKMRKEEAENLKVKEADLRFLAHLKQEMDDKSLTLKKAQEKC
AAIEQECDRCEEEMKPIDARLTEIRNVEYEVGKHQSKKVEIETEQKNCQEQILALSSNIK
VPYEGSREELEQEICDFGQKMLEKRQRRNVLDKKVDVLRQEEKTLQKTFTDLDKRRILLM
QQRQKEQECISKRAEQLKTLCQQLGITLTEDLEFQPESVPGVLEKIENSLVNKECSITES
VAQTDQDDNERQREIDTQRVELTKVEEGVVAYEKQKNLNEKELSTITKEITEIESSARRI
KILSENIERLMKMMDEMNGKCNQETMRADIAENKTRIVKLQEQFRELDERLTKLNMMSKL
TAEITLKQKELEKKEQDVRRVKGKHADNFKKLLSRPVEFNYKRAMQLCSEKLRDNIKELN
GKSNKLQLEQQSCEIKRKNLKAELLKLEKELEESKEKVYEACHAATYEDTLAKSKATMAK
YQLEHGALLSAEAMYKKYIEKVTEEPCCPLCHKDMTDNEASDITLELSDEINRLPENIKR
TEKLLKAEQKKYENLLHMKSVVETVTKLEVDIPKKKKELTTIEEKLAKCVEEYESLQMLL
AEPSASLELADSMMGDVSLLDEAMKEITRLKNDIAQLNTRLPADFESDVNIEELQMIKAG
VSEELDTERHKLEEKQANLEKIVNALNKMQEQKNAYQDERLKLQEGQQSLAQLQERQTEL
KNLIESKTAEIKLLRTKLPTLKQKLNSSVAEKNRLLEASRKRVTKMQSELNAYKKMEHEI
ERLNTEVLEFQMLNLVAEIAELKESIKKCKAEIEKKAAEISKTSTELEAVKTECLQQETL
ERDLKDNRELKILQDKKASIDVRVQAITKQLGKMDFPKLSVEKNTLIKQREKGTERKGEL
IGKIGEVKNQIKKLEGEINEPKYRNSLENYRRADYQVEVSKQLIKELGESRISLEWSLMQ
FHAEKMERINKLIREYWRLIYRGNDIDYIQIQTDEVDLNANADRRRNYNYRVMQSKNGSE
IEMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNILSLCEALNRIVD
ERRMQSNFMLIIITHDDDFISTLGKITTYHRVFRNDECKSVIRKVKVA
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtccactattgaaaaattatccatacaaggtatacgtagttttggttccaattcggag
gatgttcagactataacattttcctcgccggttacactgattcttggtgaaaatggttgc
ggcaagaccacaataatagagtgccttaaatatggtctcactggtgaagtgccgcctggt
ggtgaccacggtcgaagttttgtacatgatccaaaaatatttaatcaagctggaactttg
ggtcaaatcaaattggaagttagtaatctgcaaggaaaacgcttatccgtttgtcgctct
atgaaaatatccaacaaacgtggtaaatattcatttgaaacgctagatgcgactatgaac
tatatagatgataaagctgatggcaaaggctctacgaattccattagtaagcgttgtgtt
gatgtcgatgtggctatgtgtcagtttatgggtgtgtctaaagctataatcaataatgtg
ttgttttgtcatcaggagaattctagttggccattggacgagtctaaaaagttgaaagat
aaattcgatgccatattcggcataactgaatttaataaaacaatcgaacgtataataaaa
atgcgcaaagaggaggcagaaaacttaaaagtcaaagaagcggatttacgctttcttgcg
catttaaagcaagaaatggatgataaatcgttaactttgaagaaggcccaagagaagtgt
gcagctatagagcaagagtgcgatcgttgtgaggaagaaatgaagccgatcgatgcacgt
ttgacggaaatacgcaacgtcgaatatgaagttggcaagcatcaatcaaaaaaggtcgaa
atcgaaaccgagcaaaagaactgtcaggagcaaatattggcattaagcagtaatataaaa
gtgccatacgaaggtagtcgcgaagaattggagcaagaaatttgtgattttggtcaaaaa
atgcttgaaaaacgtcaacgccgcaatgtgcttgacaaaaaagtggacgttttgaggcaa
gaagaaaaaacactacaaaaaacctttacggatttggataaaagacgcatactgctaatg
caacaaaggcaaaaagaacaagaatgtatttcgaaacgtgccgaacagttaaaaacactt
tgtcaacaattaggtattacacttaccgaggatttagaatttcaacctgaaagtgtgcct
ggtgtattggaaaaaatcgaaaactcactggtaaataaagagtgcagcatcacggagagt
gtggcgcaaacggatcaagatgataatgaacggcagcgagaaatagatacgcagcgcgtg
gaactcactaaagtggaagaaggcgttgtcgcatatgaaaaacaaaaaaacctgaatgaa
aaggaattgtcaactattaccaaagagattaccgaaatagagagctctgcgcggcgtata
aaaattttatcggaaaatattgaacgccttatgaaaatgatggacgaaatgaatggtaaa
tgcaatcaggaaaccatgcgagctgacattgctgagaataaaacgagaatagtaaaactg
caagagcaatttcgtgaattagatgagcgtctaaccaaattgaatatgatgtccaagcta
acggctgagataacgctgaaacaaaaagagttggagaagaaagagcaggacgtaagacgt
gtaaaaggtaaacatgcagacaactttaagaaactgctctcacgtcccgtagagttcaac
tataaacgcgcaatgcaattgtgcagcgagaaattacgtgataatattaaggagctgaac
ggaaaatccaataaactacaattggaacaacagtcgtgtgagataaagcgtaaaaaccta
aaagcagaattactgaaattagaaaaagaactggaagagtcaaaagagaaggtttacgaa
gcgtgtcatgcagcaacgtacgaggatacgctagctaaaagcaaagccaccatggcgaaa
tatcaattggaacatggcgccttgctctctgccgaagccatgtataaaaaatacatagaa
aaggtcacagaggagccgtgctgcccgctatgtcataaagatatgactgataatgaggcc
tccgatattaccttggaattatctgatgagataaatcgtttgccagagaatataaaacgc
acagaaaagcttttgaaagcagagcagaagaaatatgaaaatctattacatatgaaatcg
gtcgtagaaaccgtgactaaactggaagtggatattccgaagaaaaagaaagaactcacc
accatagaagagaaattagcgaaatgtgtagaagaatatgaatcactacaaatgttattg
gctgagccgagcgcttcattagagttggctgattcgatgatgggcgatgtttcactactg
gatgaggctatgaaggagattacgcgattgaaaaatgatattgcgcaattaaatacaagg
ctgcctgctgattttgagtccgatgtcaatatagaggagttgcaaatgattaaagcgggt
gtatctgaagaactggataccgagcgccataagctagaagagaaacaggcaaatctggag
aaaatcgtgaatgctttgaataagatgcaagaacaaaaaaacgcttaccaagatgaacgc
ttaaaactgcaagaaggccaacaatcgttagcgcagctgcaggagcgtcaaacagagtta
aaaaatttaattgaaagcaaaacagccgaaataaaactattaagaactaaattgccaaca
ttgaagcaaaagctgaattcctcggtagctgagaagaatcggcttttagaggcctcgcgc
aagcgtgtgacgaaaatgcaaagcgaattgaatgcttataagaaaatggaacatgaaata
gagcgtttgaatactgaagttttggaatttcaaatgttaaatcttgttgctgaaattgca
gaattgaaagaatcgataaagaaatgcaaagcggagattgaaaagaaggctgcagaaatt
tccaaaacttcaacagaactcgaagcggtcaaaaccgaatgcttgcagcaagaaacgctc
gaacgtgatctgaaggataaccgtgaattgaagatattgcaggataaaaaggcgagcatt
gacgtgcgggtgcaagctattaccaagcaattgggaaaaatggatttccccaaactgtca
gtggagaagaatacattgatcaaacaacgtgaaaagggcactgagcgtaagggcgaatta
atcggtaaaattggcgaagttaaaaatcaaataaaaaaattggaaggtgaaataaatgag
ccaaaatataggaattccttagaaaattatcgtcgtgccgattaccaagtagaagtaagc
aaacagctgattaaggagttgggtgagagtcgcatcagtttagagtggtcgcttatgcaa
tttcatgctgaaaaaatggaacgtattaataaacttatacgtgagtattggcgtctaatt
tatcgtggcaacgacatcgactacatacaaatacaaaccgatgaagtggacctgaatgcg
aatgccgatcggcgacgcaactacaattatcgtgttatgcaatcgaagaatggctccgag
attgagatgcgcggtcgttgtagtgctggtcaacgtgtattggcatcgttaattatacgc
atggccttggccgaaacttttagcagcaattgcggtgtgttagcgctggatgagccgacc
accaatttggatcgtaataatattttatcattgtgtgaggcattaaatcgcattgtagac
gaacggcgcatgcaatcgaactttatgttgatcataattacgcatgatgatgatttcata
tccactttgggcaaaataacaacctatcatcgcgtatttcgtaatgatgaatgcaaatcg
gttataaggaaagtgaaggtggcctaa
DBGET
integrated database retrieval system
