Bactrocera oleae (olive fruit fly): 106618983
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Entry
106618983 CDS
T07646
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03020
RNA polymerase
bod03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106618983
09124 Replication and repair
03420 Nucleotide excision repair
106618983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bod03021
]
106618983
03400 DNA repair and recombination proteins [BR:
bod03400
]
106618983
Enzymes [BR:
bod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106618983
Transcription machinery [BR:
bod03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106618983
DNA repair and recombination proteins [BR:
bod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106618983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106618983
NCBI-ProteinID:
XP_014092418
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYEDDEMYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIDLQAEAQHTSGEIETPPRFLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKIIEGADPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKSEIRSCLEHSSRPTSTLWVNMM
ARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQ
KFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVDMLKERDYNNYSWQVLVASG
VVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRIGDQEENFEKPNRQTCQG
MRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSTTKRFSKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMAFTCE
GLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVQ
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgaagatgatgaaatgtacgaagaagagaatgcggaggaaatctcccacgaa
ttgtggcaggaagcttgctggattgtaatcaacgcctatttcgatgaaaagggtttagta
cgacagcaattggacagttttgacgaatttatacaaatgtctgtgcaacgcattgtagaa
gactcgccggcaattgatttgcaagcagaagcccaacacacatctggtgaaattgaaaca
ccccctcgctttttactaaagtttgagcaaatttatctttccaaaccaacacattgggaa
aaagatggttctccaagtccaatgatgccaaacgaagcacgtttacgcaatcttacatat
tccgctccactctatgtggacataacaaaaacaaaaattatagaaggtgccgatccagta
gaaactcagcaccagaagacctttattggaaagattcctattatgttgcgttccacctac
tgtctcctttcacagctgacagatcgtgatttaacagaattaaatgaatgccctctagat
ccgggcggttatttcattattaacggatcagaaaaagtactcatcgcccaggaaaaaatg
gcaacaaatactgtatacgttttcagcatgaaagatggtaaatacgctttcaaatcggaa
atccgttcatgtctcgaacacagctccagaccgacttctaccttatgggtaaatatgatg
gctcgtggttcacagaatatcaaaaaatctgccattggccagcgcataatcgcgatctta
ccatacattaaacaagaaattcctataatgatagttttccgagctttgggttttgtagcc
gatcgcgatattttggagcacatcatctatgattttgatgatcccgaaatgatggaaatg
gtaaaaccatcacttgatgaagcgttcgtcgtgcaagagcaaaatgtagccttaaatttt
attggtgctcgtggcgcacgaccgggtgtaacaaaagacaaacgtataaaatacgcaaaa
gaaattttacaaaaggaaatgttgccccatgtaggcgtatccgatttttgtgaaacaaag
aaagcatattttttgggttacatggtacatcgtttactgcttgcttcgctcggtcgtcgt
gagttagacgatcgtgatcactacggtaacaaacgtttagatcttgccggacccctattg
gccttccttttccgtgggttattcaagaatcttatgaaagaagtccgtatgtacacacaa
aagttcatcgatcgtggaaaggatttcaacttagaattagccatcaaaacgaatataata
acagacggtctgcgttactctttggccactggtaattggggtgatcaaaagaaggcacat
caggcccgcgctggcgtgtctcaggtgttgaatcgtttaacttttgcatctacattgtca
catttacggcgtgtcaactcacctatcggacgcgatggtaaattggccaaaccacgtcaa
ttgcacaatacactctggggcatgttgtgcccggccgagacaccagagggggcggctgtc
ggtctggtaaagaatttagcacttatggcatacatttctgttggttcccagccttcgcct
attttggaattcttggaagaatggtccatggaaaatcttgaagaaatcgccccctctgcc
atcgcagatgcaacaaaaattttcgttaatggctgctgggtcggcatacatcgtgatcca
gagcagttgatggctacactgcgtaaattgcgtcgtcagatggatatcattgtctcggaa
gtatcaatgatccgtgatattcgcgatcgtgaaataagaatatacacagatgccggtcgt
atttgtcgtccgctattgattgttgagaatggctcactgttgttgaaaaaaactcatgtg
gacatgttaaaggaacgtgattataataactatagttggcaagttctggtcgcatcgggt
gtagtggaatacattgacactttggaggaggagactgtgatgattgcgatgtcgccatat
gatttgaaacaagacaaggactatgcatattgtacgacctacacacactgcgaaatccat
ccggcgatgattttaggggtatgtgcctccattattccattccccgatcacaatcagagt
ccgcgtaacacatatcaaagcgctatgggtaaacaagctatgggtgtctacattaccaat
ttccacgtacgaatggacacactggcacacgtactctattatccaatgaaaccgttggtc
actacacgatccatggagtatctgcgcttcagagagctaccagctggcataaattcaatt
gttgccattttatgttacaccggatacaaccaggaagattctgtcattttgaatgcttcg
gcagtggagcgtggctttttccgttcagttttctaccgctcatataaagattctgagaac
aagcgtattggcgaccaagaagagaacttcgagaagcccaatcgtcagacttgtcagggc
atgcggaatgctcactacgacaaattggatgatgacggtattattgcgcctggtattcgt
gtatcaggtgatgatgtggttattgggaaaacaattactctgcctgaaaatgacgatgag
ctcgatagtaccacaaagcgtttcagtaagcgagatgcttcgacttttctacgtaactcc
gaaacgggtattgttgatcaagtcatgttaacactgaatagcgagggttataaattctgt
aaaattcgtgtgcgctcagtgcgtataccgcaaattggcgataagtttgcctcacgtcac
gggcagaagggtacttgtggcatccagtatcgacaagaagacatggcgtttacatgtgaa
gggcttgctccagacattattatcaatcctcacgccattccatctcgtatgacaattggc
catttaatcgagtgtttgcaaggaaagttgggctcaaacaaaggtgaaattggtgatgct
acgccattcaacgatgctgtgaacgtacaaaaaatatccacgttcctacaggagtatggc
tatcatttgcgtggtaacgaggtgatgtacaacggtcatacgggtcgcaaaatcaatgca
caagtattcttgggacctacctattaccaacgtctcaagcacatggtggatgacaaaatt
cactctcgcgcacgtggtcccgtacagattttggtgcgtcaacccatggagggtagggca
cgcgatggaggtctacgtttcggtgagatggagcgagattgtcagatatctcatggagct
gcacaatttctacgcgaacgtctctttgaggtttccgatccatatcgtatacatgtgtgt
aatttctgtggtcttattgccatagctaatttgcgtaataatacttttgagtgcaagggt
tgcaaaaataaaacccaaatatcacaagttcgtttgccgtatgccgcgaagttgctgttc
caggagctaatgtcgatgaacattgctccgcgactgatggttgtgcagtag
DBGET
integrated database retrieval system
