Bactrocera oleae (olive fruit fly): 106618984
Help
Entry
106618984 CDS
T07646
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03020
RNA polymerase
bod03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106618984
09124 Replication and repair
03420 Nucleotide excision repair
106618984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bod03021
]
106618984
03400 DNA repair and recombination proteins [BR:
bod03400
]
106618984
Enzymes [BR:
bod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106618984
Transcription machinery [BR:
bod03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106618984
DNA repair and recombination proteins [BR:
bod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106618984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106618984
NCBI-ProteinID:
XP_014092419
LinkDB
All DBs
Position
Unknown
AA seq
1931 aa
AA seq
DB search
MNVGCVARQVKAIQFGVLSPDEVKRLSVTEGGITRAVIVEDGKPALGGLMDPRQGVLDRE
SRCLTCAGNIVDCPGHFGHIELSLPVFHIGFLLKTIKILRCVCFSCSKLLVSPTNAKVKE
MLNRTKARPRMRLSLMRELCKSKTICEGGENIDISITRNNERNISDHGGCGHHQPRITRH
KLELFATWQRLTEYRQERQIILTAERVLEIFRNISDEDCIYLGMDPKHCRPDWLLISVLP
VPPLSVRPSVLMYGSSRSHDDLTHKLADIIKANNELKKCIETGAADHLIRECSALLQFHV
VTVIDNEMPGLPRALQKSGRPLKSIKARLKGKEGRIRGNLMGKRVDFSARTVITPDPNLN
IDQVGVPRSVAQNLTYPEVVTPFNIELMQTLVQRGNTQFPGAKYIIRSNGDRIDLRFHPK
PSDLHLEFGYKVERHLRDNDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNA
DFDGDEMNLHVPQSMETRAEIENLHLTPRQIVTPQTNKPVMGIVQDCLTGVCKMTKRDVF
ITHEQFMNLLMHMPCWDGVMPKPCILKPTLLWSGKQLFSLIIPGNLNMIRTHSTHPDEED
DSQYRWISPGDTKVIVEYSELIMGILCKRTLGATAGSLLHIAYIELGHQIAGEFYANIQK
VVNAWLLLEGHSIGIGDTIADPATYKEIQNAIAKAKNDVMLVIQKAHHMQLEPTPGNTLR
QTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVIAGSKGSNINISQVIACVGQQNVE
GKRIPYGFRKRTMPHFIKDDYGPEARGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKT
AETGYIQRRLIKAMESVMVQYDGTVRNAESQIIQLRYGEDGLCGESVEFQTLPTIQLSNK
AFEKQFKFDITQTRNLRKYFNEETVRDITESTEIIAQLEVEWEQLCRDREALRQIFPTGD
SKVVLPCNLQRMIWNVQKIFHVDKRSTTALNPLDVVKGVRELLKQCVIVAGTDYISQQAN
DNATFLFQCLVRSTLCSKVVAESHHLTPESFEMLLGEIATRFQLSQICPGEMVGALSAQS
LGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKRPRSPSLTVFLTGKPARDVEKA
KDVLCRLEHTTLKKVTANTAIYYDPDPMRTVVGEDQEFVNIYYEIPDFDPNEISPWLLRI
ELDRKHMTEKKLTMEHIAERIAASFGDDLKCIFNDDNAPRLIMRIRIMNTPNSESKFQAD
DLAEEEASLTRLDDNMFLRCIESNMLSDMTLQGIESISKVYMHLPQVTSKKRIYITETGE
FKSVAEWLLETDGTALMRVLSERNVDQRRTFSNDICEMFTVLGIEAVRKSIEKEMNNVLQ
FYGLYVNYRHLALLCDIMTAKGHLMAISRHGINRQQTSPLMRCSFEETVDVLLDAAAHGE
RDAMRGVSENIIMGQMPHIGTGCFDMILDASKCKLAMEVDSINNKNALFYGSLFTPNIFP
GSGRSGMIEYSPGLGDGLTPQSARSVCFSPLSNMSSPTMTADEFCSSPYSSPSTTSLKSY
YGGASYYSPISPINDQKAFRSANISGSCSHLSCSNDLLTTIMQSSKYSPSSPEFSPHYQR
YLQVHSPQSPSNSNITFYSPDSSTMSYNSVTGSSRYSPTSPGYSPQTNNYSPTSPSYSPT
IMSSNRCCNSFSPSSPTSNNDSLYSPSSPLNTPDSLTDKMSTASDSCSKRTKPKKYRSTP
YFYAESNGTPSSSATYSPTSPIYAHYSPSSPNCVMQTPHYSPSTLSYNPLSPSYTQISPS
FTTNSPQYSPLSPKINYSPTIASPQMHFILPPSPQQQYSASMQSPRYPSSSSITYSPTSP
KHSPNSNRYSPSSPASPNYSTATHSNVVYSPHSPSFYSSSLSSPVHSSSESPMSPINPNS
PASPQYSPTSN
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttggctgtgttgcgcgacaggtgaaggccatacaattcggtgtactctccccg
gatgaagtcaaacgattatcggtaacagaaggtggtatcacacgtgcagttatcgtggaa
gatggtaaaccggctttaggtggtttaatggatcctcgccaaggagttttggatcgagag
tcacgttgccttacatgtgctggtaatatcgtcgactgtcccggccattttggtcacatt
gaattaagcttaccagtatttcacattgggttccttttaaaaacaattaaaatattgcgt
tgtgtgtgtttttcttgttccaaactattggtgtcaccaacaaatgcaaaggtgaaggaa
atgcttaatcgcaccaaagcacgtccacgcatgcgcttaagcctcatgcgtgaattgtgc
aaatctaaaacaatatgcgaaggtggcgaaaatattgacatttctatcacacgcaacaac
gaacgaaatatctcggatcatgggggctgcgggcatcatcagccgcgcattacacggcac
aaattggagttgtttgccacttggcaacgtttaactgaatatcgccaagaacgacaaata
atattgacagcggagcgagtattagaaatttttcgaaatatctccgacgaagattgcatt
tatttaggtatggatccgaaacattgccgacctgattggttgctcatctcagtactacca
gtaccaccactttctgtgcgaccatccgttctgatgtatggcagctcacgttcgcacgac
gaccttacacacaaattagcagatattattaaagcgaacaatgagctaaagaagtgcatt
gaaacaggcgccgcagaccacttaataagggagtgttccgccctgttgcaatttcatgta
gtcacagttatcgacaatgaaatgcccggcctaccacgtgctctacagaagtcaggccgt
cctttgaagagcatcaaagcacgtctaaagggtaaagaaggacgtatacgaggcaactta
atggggaagcgtgtagacttttcagcacgtaccgtaattacgccggatccgaatttaaat
atcgatcaagtgggtgtgccaaggtctgttgcgcaaaatctgacgtatcccgaggtagtg
acaccattcaacattgagcttatgcaaacccttgttcaacgcggcaatacacaatttccc
ggcgctaagtatataatacgtagcaatggcgatcgcattgacttgcgtttccacccaaaa
cccagtgatttacatttagagtttggctacaaggtcgaacgccatttacgcgataacgat
ttggtgatatttaatcgtcagccaacgctgcacaaaatgtcgatgatgggtcatcgtgtc
aaagtgctgccttggtccacattccggatgaacctttcttgtacctcgccatacaatgca
gatttcgatggtgatgaaatgaatttacatgtacctcagagcatggagacacgcgccgaa
attgaaaatctccatctgacaccacgacaaattgtcacaccgcaaaccaataagccggtt
atggggattgtccaggactgcttgacgggcgtgtgcaagatgaccaaacgcgatgtcttc
ataacacacgagcaattcatgaatttgctgatgcatatgccgtgctgggatggtgtgatg
ccgaagccgtgtattttgaaacccacacttttgtggtcgggcaagcagcttttttcttta
attataccgggaaatttaaatatgatacgcactcattcaacgcatcctgatgaagaagat
gatagtcaatatcgttggatttcgccgggtgataccaaagtaattgtcgaatatagtgaa
ttaattatgggtattctttgtaaacgcacactgggtgccaccgctggatccctcctgcac
attgcttacatcgagctcggtcatcaaatcgctggtgaattctatgcaaatatacagaag
gttgtcaacgcttggcttttactcgaaggtcacagtattggaattggcgacaccattgcc
gatccggccacctacaaggagatacaaaacgccattgccaaggcgaagaatgatgtaatg
ttagtcatacagaaggcacatcacatgcaattggagccaacaccaggcaacacgctgcgt
caaacattcgaaaatcaagtcaatcgcattttgaatgatgcgcgcgataagacgggtggc
tctgcaaagaaatcgcttacggaatacaacaacttgaaggccatggtaatcgctggttcc
aagggttctaacatcaacatatcccaagtaattgcctgcgttgggcagcagaacgtcgaa
ggtaaacgtataccatacggttttcgtaaacgtacaatgccacactttatcaaggacgat
tatggtccagaggcgcgcggctttgtcgagaattcatacctagcaggcctaacaccaagt
gagttctactttcatgcaatgggtggacgtgaaggacttatcgatacagccgtaaagact
gcagaaacgggttacatacagcggcgtttaatcaaagccatggaatcggtgatggttcag
tacgatggcacagtgcgcaatgctgagagtcaaattatacagctacgttacggcgaagac
ggcctctgtggtgagtcggttgaattccaaacgctgcccaccatacagctttcgaacaag
gcattcgaaaagcaattcaaattcgacatcactcagacacgcaatttgcgaaaatatttc
aacgaagagaccgttcgtgatatcaccgaatctacggagatcattgcacaattggaggtt
gagtgggagcaattgtgtcgggatcgtgaagctttacgacaaattttcccaaccggtgat
tcgaaggtggtgttgccatgcaatttgcagcgtatgatttggaatgtacagaaaatattc
catgtggacaagcgttctaccactgctctcaatcctttagacgttgtaaaaggtgtacgt
gagttgctcaaacaatgcgtcattgtggcaggaaccgattacatttcgcagcaggccaat
gacaatgccaccttcctctttcagtgcttagtacgctcaaccctttgctccaaagtggta
gccgaaagccatcatttaacacccgaatcattcgaaatgttgcttggcgaaatcgctact
cgttttcaactctcacaaatctgtcctggcgaaatggttggcgcactatctgcccaatcg
ttaggcgaaccagcgacacaaatgacgctaaatacttttcacttcgccggtgtttcggcg
aaaaatgttactttgggtgtgccacgcttgaaagagatcatcaacgtgtctaaacgccca
cgctcaccttcgttgactgtcttcttaaccggtaaacccgcacgtgatgtagagaaggcc
aaagatgtgctgtgccgcttggaacatactacgcttaaaaaagttacggctaataccgct
atctactatgacccagatccaatgcgaactgtcgtgggggaagatcaagaatttgttaat
atttactatgaaattcctgattttgatccaaacgaaatttcaccatggctcctacgcata
gaactcgatcgaaagcacatgaccgagaagaaactcaccatggagcacatcgccgagcgc
atcgctgcctctttcggcgacgacttgaagtgcatttttaatgatgacaatgcaccacgt
ctaataatgcgcatacgcattatgaacactcctaactcggagagcaaatttcaagctgac
gacttggccgaggaggaggcatcgctcactcgcttagatgacaacatgtttttgcgctgc
atcgagagcaacatgttgtccgacatgacactgcagggtatagaatctatctccaaagtg
tatatgcacctgccacaggttacgagtaagaagcgcatctatatcacagaaacgggtgaa
ttcaaatccgtggctgaatggctgctagaaaccgatggaacagcgttaatgcgcgtgctc
agcgagcggaacgtcgaccaaaggcgcacctttagcaatgatatatgcgaaatgtttaca
gtgttgggcattgaggcggtgcgaaaatcgattgagaaagagatgaataatgtcttgcag
ttctacggtttgtacgttaactatcgccacttggcgctactctgtgacattatgacggcc
aagggtcatctgatggcaatctcacgccatggcatcaaccgtcaacaaaccagcccattg
atgcgttgctctttcgaggagacggtggatgtgctgttggatgctgcagcacacggtgaa
cgggacgctatgcgtggcgtttcggaaaacattataatgggtcaaatgccgcacatcggc
accggttgctttgacatgatacttgatgcatctaaatgcaaactcgctatggaagtagat
tctataaacaacaagaacgccttattttatggttcgttgtttacgccgaatatttttcca
ggaagtggacgcagtggcatgattgagtactcaccgggtctaggcgatggtctaacacca
caatctgcgcgttctgtttgtttctcgcctttgtcgaatatgagttcgcctacaatgaca
gcagatgaattttgtagctcaccctattcttcgccatcaactacatcgctcaaatcatac
tatggtggcgcttcatactactcgcccatttcgccaataaatgaccaaaaagcatttaga
agtgcaaatatttccggtagctgtagccatttgtcatgcagcaatgatttactaaccact
attatgcagtcttctaagtactcacccagttcaccggaattttcaccacattatcaacga
tatctacaagttcattcaccacaatcaccttcaaacagcaacatcacattttattcacca
gatagttcaacaatgtcttacaacagcgtcaccggttcttcgcgttattcaccgacctca
cccggatattcaccgcaaactaataactattcgcccacttcaccatcctattcgcccacc
ataatgagttcaaaccggtgctgtaacagtttttcaccgagctcaccgactagtaataat
gattcgttatattcaccttcctcaccgctgaacacaccagattctctaaccgataaaatg
tctacagcatccgatagttgttctaaacgtacaaaacccaaaaaatatagatctactccg
tatttctatgccgaaagtaatggcaccccatccagtagtgcaacatactcacccacaagt
cccatctacgctcattactcaccgtcaagcccgaattgtgttatgcaaacaccccattat
tcgccttccactcttagctataatcctttgagccccagctatacacaaatcagtccttcg
tttactactaattcaccacaatactcgccactaagtccaaaaatcaactattcccccaca
atcgcatcaccgcaaatgcattttattttaccaccttcgccacaacaacaatactcagca
tctatgcagagtccacgctaccctagtagctcctcgatcacttactcaccaacgtcacca
aaacattcaccgaattccaaccgttattcaccaagtagtccagccagtcccaattattcc
accgctactcattcaaatgtggtttactccccacatagccctagtttttactcatcctcg
ctatcgagtcccgttcatagctccagcgaatctccaatgtcacctataaatcccaacagt
ccggctagcccacagtattctccgacctcaaactga
DBGET
integrated database retrieval system
