Bactrocera oleae (olive fruit fly): 106619983
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Entry
106619983 CDS
T07646
Symbol
Upf3
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03013
Nucleocytoplasmic transport
bod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106619983 (Upf3)
03015 mRNA surveillance pathway
106619983 (Upf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106619983 (Upf3)
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106619983 (Upf3)
mRNA cycle factors
P-body specific factors
106619983 (Upf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Nucleos_tra2_C
Motif
Other DBs
NCBI-GeneID:
106619983
NCBI-ProteinID:
XP_014093824
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All DBs
Position
4:39918866..39921249
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AA seq
592 aa
AA seq
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MTKVENGGKPDVKSGKSEKERSNKRAHKKEKQKPQTKIVLRHLPPTMTEEEFLKQIDPLP
SHDFYYFAAPDWSLGYDATCRAYITMKNYEDVFLFRDRFDGYVFVDSKGAEYSAIVEFAP
FQGLVKNKSRRVDSKVNTIEQELHYQQFLAKLEEDREAAKGGESKLEFSLDRKKEEKITS
TPLLQYLANKKEKRREEAKRRQEEKRRQRDDDKEKKKQVQSQQQVTKIISNNEGGGGKGG
NKLASGKENIVGEKSNQPQPHEEGKSSRSQRRAERNQRRREEFERKRQERDQRDKGGEGK
SNQNNNVESNSTNDKKGKEQQQQGNKSDDGKQAQRKEGGKRYSERRERDRNRNRKDKEKE
KVKDYSVDEEVLKTESTASEAFRAAAAAAAAGGEAIVSESVMNFIRSVATAKEFVPKHKQ
QEMKDKQRKLSDEQSTEKDDEREVELKPSMEGLKKSDSNIELDTRTPKQRAADEQRRIRN
KDRPSIAIYQPKARLRISEDRDPSTSLPQSSGKSDTRSNPTSDCESVKKEETRTKKVSRY
SERRAERRNNKDKQKTSPDPIEFDQKDEMEQPKSTAENVIFENQNAEKGNEE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagttgaaaatggaggcaagcccgatgttaagtctggaaaatctgaaaaggag
cgatccaataaacgtgctcataagaaagaaaaacaaaagccgcaaacgaagatcgttctt
cgacatttaccacctactatgactgaggaagagtttctaaaacaaatagatccattgcct
tcacatgatttttactatttcgctgcacccgattggtccttggggtatgacgctacctgt
cgggcctatataacaatgaagaactatgaggatgtgtttttgtttagagatcgatttgat
ggatacgtttttgtagattctaaaggtgctgagtattcagctatcgttgagtttgcacca
tttcaaggactcgttaaaaataagtcacgtagagttgacagtaaggtgaacactattgag
caagagttgcactatcaacaattcctagcaaagttagaagaagacagagaagctgcgaaa
ggcggtgaaagcaaattagaatttagtttggatcgcaaaaaagaagagaaaatcacttca
acaccgttactccagtatctggccaataaaaaggaaaagcgacgtgaagaggccaaacga
aggcaagaggagaaacgtcgccaacgcgatgacgacaaagaaaaaaaaaaacaggtacaa
tctcaacaacaagtaaccaaaattatatcaaataacgaaggaggcggtggtaaaggtgga
aataagttggccagtggcaaggaaaatattgtcggtgaaaagagtaaccagccacaacca
catgaagagggtaaaagctcacgttcccagagacgagctgagcgcaatcaaagaagacgg
gaagagtttgaacgtaagcgacaagaacgagatcaacgagataaaggcggcgaaggaaaa
tcaaatcaaaacaataatgtcgagtctaattcgaccaacgataaaaagggtaaagaacag
caacaacaaggaaataagtcagatgatgggaagcaagcacaacgtaaagaaggtggaaaa
cgttacagtgaacgtcgagaacgagatagaaatcgcaaccgcaaggataaagaaaaagag
aaggttaaggattattcagttgatgaggaagtgcttaaaaccgaaagtacagcgtcagaa
gcttttagagccgcagccgctgccgcagctgctggtggagaagccattgttagcgagtct
gttatgaattttatacgcagtgtagcaaccgccaaagagtttgttccgaaacataaacaa
caagaaatgaaagataagcaaagaaagttgtctgacgaacaatcaaccgaaaaagatgac
gagagggaagttgagttgaaaccgtcaatggaaggtttgaagaaatctgattcgaatata
gaacttgatactcgtacgccaaaacaacgggctgctgatgaacagcgccgtattagaaat
aaggatcgtccttcgattgccatctatcaaccgaaagcacgtttacgtatttcggaagat
cgtgatcccagtacatctctacctcaaagtagtggaaaaagcgacactcgtagcaatcct
acatctgattgtgaaagcgttaaaaaagaggaaacgagaactaaaaaggtttctcgttat
tcagagcgacgcgcagaaaggcgtaacaataaggacaaacaaaaaacttcgcctgatccc
attgaattcgatcaaaaagatgaaatggaacagcccaaatcaacagcggaaaatgtaatc
tttgaaaaccaaaatgctgaaaaaggcaatgaggaataa
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