Bactrocera oleae (olive fruit fly): 106620720
Help
Entry
106620720 CDS
T07646
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bod03016
]
106620720
Enzymes [BR:
bod01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
106620720
Transfer RNA biogenesis [BR:
bod03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106620720
Prokaryotic type
tRNA splicing ligases
106620720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
106620720
NCBI-ProteinID:
XP_014094780
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRPYNEELKYLEKISDCCWRIKREFQPNMKVEGCFYVNSRLERLMLEELKNSCRPGAV
GGFLPGVKQIANVAALPGIVGRSIGLPDIHSGYGFAIGNMAAFDMLDPTSIVSPGGVGFD
INCGVRLLRTNLFEKDVQPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDMEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQIVDEIYD
KWSASKMGIEEKGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDQIETNDRQLACARIN
SQEGQDYLKAMAAAANFAWVNRSSMTFLTRQSFAKMFNTTPDDLDMHVIYDVSHNIAKVE
NHIVDGKEKQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGTMGTCSYVLTGTEKGM
HETFGSTCHGAGRALSRAKSRRNLDYKDVLEKLDQMGIAIRVASPKLVMEEAPESYKDVT
DVVDTCHMAGISKKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttgttaggccttataacgaagaattgaaatacctcgagaagataagcgattgctgt
tggcggataaaaagagaatttcagcccaatatgaaagtggaggggtgtttctatgtaaac
agccggttagaacggctcatgctagaagagcttaaaaactcatgtagaccgggagcagtc
ggaggttttttgccaggagtaaaacaaattgctaatgtggctgctttgccaggcattgtg
ggacgatctatagggctcccggatattcattctggttatgggtttgctattggaaatatg
gccgcatttgatatgctcgatcccacatcaatagtaagccctggaggagttggttttgat
atcaattgcggtgtacgtttactgcgtacaaatctctttgaaaaagatgttcaacctgtt
aaagagcaattggcgcaatctctttttgaccatattccagttggagttggttctaaaggt
ataatcccaatgaatgctcatgacatggaagaagctcttgaaatgggcatggattggtct
cttcgtgaaggatatgtgtgggctgaagacaaagagcactgtgaagaatatggtcgtatg
ttaaatgcggatccatcaaaagtaagtttgcgtgcaaaaaagcgtggtcttccacaattg
ggaacattaggagcaggtaatcactatgcagaaattcaaattgttgatgaaatttatgac
aaatggagtgctagtaaaatgggaattgaagaaaaaggtcaagtatgcgttatgatacat
tctggcagtcggggatttggacatcaagttgctactgatgctttggttcaaatggagaaa
gccatgaagagagatcaaattgaaacaaatgaccggcaattagcatgtgctcgcataaat
tcacaagaaggtcaggattatttaaaagccatggcagctgccgcaaatttcgcttgggtt
aatcgaagctcgatgacttttcttacgcggcagtcttttgccaaaatgttcaacacaact
cctgatgatcttgatatgcacgtgatttatgatgtgtcccataatattgcaaaagtagaa
aaccacatcgtcgacggcaaggaaaaacagttgctggtgcatagaaagggatcaacacgg
gcttttccaccacatcatcctcttataccagtggattatcaattgactggccaacctgtt
ttagtaggcggtacaatgggcacatgcagttacgtgttaactggaaccgagaaagggatg
catgaaacttttggctctacatgtcatggagcaggacgcgctttatcccgtgctaagtca
cgacggaacttagattataaagacgttcttgaaaaattggaccagatgggtattgctata
cgtgtggcatcaccaaaacttgttatggaagaagcgccagaatcttacaaagatgttact
gatgtcgttgatacatgtcatatggcaggaattagtaaaaaatgtataaaattacgtcca
attgctgtaattaaaggatga
DBGET
integrated database retrieval system