Bactrocera oleae (olive fruit fly): 106621940
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Entry
106621940 CDS
T07646
Name
(RefSeq) zinc finger protein swm
KO
K13192
RNA-binding protein 26
Organism
bod
Bactrocera oleae (olive fruit fly)
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bod01009
]
106621940
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106621940
03041 Spliceosome [BR:
bod03041
]
106621940
Protein phosphatases and associated proteins [BR:
bod01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106621940
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106621940
Spliceosome [BR:
bod03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106621940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
PWI
RRM_1
zf-CCCH
zf_CCCH_4
SPO24
Fes1
UBR4
Motif
Other DBs
NCBI-GeneID:
106621940
NCBI-ProteinID:
XP_014096440
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MIVKNQEALKSWLVVVLEPLCDADSSALARYVLALLKKDKPEKELKKLMIEQLDVFLGEE
TRPFVERLFSAINSEDYFTDILLPTPKLSGDNFVGEEVVSDMMDTRNVCIEGPNNTEPQL
KIDNLPNTVCAENVQTPPLDDNKAKELGSSNTSDNLKEDITGQVVHYPATIKSETPSSNP
AQHSQAGSNSHHVRSASPPLRTNADKENQPRESRRRRSSLRSRSHSRSRSRSNERHSRRS
RSRDRRINEREKMQRQFRNKSPPTIDLRHVGSHERRRGAGGSGTERRRIGNSSNMTGSDE
RSPRFLGNGGEGAGRKNRLNRSNSCSRSPSLERGGRNKGSPSVARVVRGSPDRHVHHTHS
QHESEKRQRCRDFDEKGYCVRGETCPWDHGINPVVFEDINNTGLIGMSLPEYNPDAPDIW
MRSSGSMVSSNPLLTGRSAVSGAVNASGINPFTGVARGGGIIPVSGVGAAVGFPPIGTVA
DKQNNSGSISADYSGNTNASSGFRVATPMLSFPFNASAVSAPLQRELIPIPVVDAGNLGS
GGDISQMAQGKRRFDLEDSVAIAEGPVKRKLPLNSRLGPRLPSIQSNCSLELRKIPRGMN
TIAHLNNHFAKFGKIVNIQISYDGDPEAAIVTFSTHAEANVAYRSTEAVLNNRFIKVFWH
SQDANALINDISPITMGSTRKNSQYHLNNVSAVPTPSADSAKTANENVANPSVTSSGSIP
VCDTLNATNVNIPVAAAHVPPTSLRLKNNVSRSHNTGPTNAIIRKKQEEQAKAVVQLANG
LRKRKQELLQSYVKQMKSALEIVERCEPNDPQRTKTLDTIKVLQETIDKLRKEIATEQEQ
IQAQIQNQHPPPPKKTKEQQKKELLDIELELIAQQQEGNDTTAIQKRLEELQRSLGVVPG
NAAVGVVPPHPLPMGGKVPHFASGRTNPRSRPSFPEGSTRVDRRPKTIVVTGFTSGEADF
VLGHFKHFGEITKHDVDKEIPQLILSYATRINAEQAVLRGKVFKDKRLQITWAPVISTAS
VTTGILMTDKVCKPEEKLNSPNPIKSAAAQNSNDKQSNDSDVGGETLPELRLEDEEEDEE
SEDRSWRR
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtaaaaaatcaggaagctctgaaaagctggcttgttgtcgtattggaaccttta
tgtgatgcggattcttctgcccttgcacgttatgtgttggcgttgcttaagaaagataaa
ccagaaaaagaattaaaaaaattaatgatagaacaacttgatgttttccttggtgaggaa
acacgaccttttgtagagaggctattcagtgccattaacagtgaagactattttactgat
atcttactaccaacaccaaaattaagcggagataattttgttggggaagaagtcgtttct
gatatgatggatactagaaatgtatgtattgaaggaccaaacaatacagaacctcaattg
aaaattgataacctgccgaataccgtttgtgccgagaatgttcaaacaccaccattagat
gacaataaagcaaaagaactcggcagcagcaatacatcggataatttaaaggaggatata
actggccaggttgttcattaccctgccacaattaaaagtgagacgccatcatctaatcct
gcacaacattctcaagctggatctaacagtcatcatgtacgcagtgcaagccctcctcta
agaactaatgctgacaaagagaaccaaccgcgagagagccggcgtcgtcgttcttccctt
agatcccgttcgcattcacgttcacgatcacgatctaatgaaagacattcgcggcgaagt
cgttctcgtgatcgccgaataaatgaacgtgaaaaaatgcaacgtcaatttcgcaataaa
tctccaccgacaatagacttacgacatgtaggatctcatgagcgtaggcgaggtgccggt
ggtagtggcaccgaacgtagacgtattggcaacagtagcaacatgacaggttcagatgaa
agatcaccccgttttctaggaaacgggggagaaggtgctggccgcaaaaaccgtctgaat
cggtcaaattcatgcagtcgttcaccttctcttgaacggggaggtagaaataaagggtca
ccgagtgtagcacgagtcgttcgcgggtcacctgatcgtcatgttcaccatacacattca
caacatgaatcagaaaagcggcaacgttgccgtgattttgatgaaaaagggtactgtgtc
cgaggagaaacatgtccttgggaccatgggattaatcccgttgtatttgaagatataaat
aataccgggttaatcggaatgtcccttccggaatataacccagatgctcctgatatatgg
atgagatcttctgggtcaatggtttcttctaacccgctattaactggtagatccgcagta
agtggtgctgttaatgcctcgggtattaatccgttcactggtgtagcgaggggaggggga
ataattccggtttctggagttggagcagccgttgggttccctccaattggtactgttgca
gataaacaaaacaactctggttcaatttcggcagactatagtggaaataccaatgccagc
tccggctttagagttgctaccccgatgctttcttttcctttcaatgcttctgccgtttca
gctccacttcaacgagaactaattccaattccagtagttgatgcaggtaatcttggatcg
ggtggagatataagtcaaatggcacagggtaagcgtcgttttgatttggaagactcggtg
gctattgctgaggggcccgtgaaacgtaagctgccacttaacagtcgtcttggtccgcgt
ttaccaagtatccaaagtaactgttctctggagttacgaaagataccgcgcggcatgaat
acaatcgcacatcttaataatcactttgctaaatttggcaaaattgtaaatatacaaatt
tcttatgatggtgatcccgaagcagctattgtaacgttttcaacacatgccgaggcaaat
gttgcttaccgcagtacggaagctgtgcttaacaatcgctttataaaagtattttggcac
agtcaagatgcaaatgcattaatcaatgatatatcccctataactatgggtagtacacga
aaaaatagtcaatatcatttaaataatgtctccgctgttcctactccctcagctgattca
gcaaaaacagcaaatgaaaatgttgcaaatccgagcgttacttcgtctggaagtatacct
gtatgtgatacattgaacgcaacaaacgttaacatacctgtggctgccgctcatgtaccg
ccaacatctttgcgattaaaaaataacgtatcacgtagtcacaacacaggtccgacaaat
gccataatacgtaagaaacaagaagagcaagctaaagctgttgtacaactcgccaacgga
ctacggaaaagaaaacaggaactgttacaaagttacgtaaaacaaatgaaatcggctttg
gaaatagtagaacgctgcgaaccaaatgaccctcaacgtactaaaacccttgacaccata
aaagttctgcaagaaactattgataagttacgtaaggagattgccacagaacaagaacaa
atccaagcacaaattcaaaaccagcatccacctccaccaaagaaaactaaggaacaacaa
aagaaagaattgctggatatagaattggaactaatagctcaacaacaggagggaaatgat
actacagccatacaaaaacgccttgaagaactgcagcgcagtcttggtgtcgttcctggt
aatgcagccgttggtgttgtaccacctcacccgttaccaatggggggcaaagttcctcac
ttcgcctctggaagaacaaatccccgatctcgtccatcatttcctgagggatccacgcgc
gttgaccgccgacccaaaactatagtggttaccggttttactagtggggaggctgatttt
gtgttaggccactttaagcattttggagaaataactaaacacgatgtggataaagaaata
ccccaactaatattatcctatgctactcggataaatgcggagcaggctgtattgcgtgga
aaggtttttaaagataaacgacttcagataacttgggctccggtcatatcaacagcatcg
gtaactacgggaattttgatgactgataaggtgtgcaagccagaagaaaagttgaatagt
cctaatccaataaaatcagccgcagctcaaaatagtaatgataaacagagtaatgattct
gatgtcggtggagaaacattgccagaattgcggcttgaggacgaagaggaagatgaggaa
tctgaggataggtcatggcgacgctga
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