Bactrocera oleae (olive fruit fly): 106622107
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Entry
106622107 CDS
T07646
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03013
Nucleocytoplasmic transport
bod03015
mRNA surveillance pathway
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106622107
09122 Translation
03013 Nucleocytoplasmic transport
106622107
03015 mRNA surveillance pathway
106622107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106622107
03041 Spliceosome [BR:
bod03041
]
106622107
Enzymes [BR:
bod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106622107
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106622107
Spliceosome [BR:
bod03041
]
Complex C
Other components
EJC/TREX
106622107
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106622107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
CSN1_C
Motif
Other DBs
NCBI-GeneID:
106622107
NCBI-ProteinID:
XP_014096660
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All DBs
Position
6:4170305..4171802
Genome browser
AA seq
423 aa
AA seq
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MADNIDLLDYEEEELIEPTIESAAKTPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVPYVLVMCHTRE
LAFQIGKEYERFAKYMTNVKVAVYFGGLAIQNDEKSLKETMPHIIVGTPGRILALIRNKK
LNLKNLKHFVLDECDQMLEHIDMRRDVQEIFRGTPHAKQVMMFSATLCKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVQLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIALS
QLLTEQNFPAVGIHRGMTQEERLKRYQEFKDFQKRILVATNLFGRGMDIERVNIAFNYDM
PESSDTYLHRVARAGRFGTKGLAISFVSDEADNKILSEVQSRFDVQITELPDQIELSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacatcgatctcttggactacgaggaagaggagctgatcgaacccaccatc
gaatcagcggccaaaacaccgaagaaagacgtgaagggcacttatgtgtccatacacagc
tccggctttcgtgattttctcctaaaaccggagattctacgtgctatcgtggactgcggt
ttcgagcatccatccgaggtgcaacatgaatgcataccacaagcggtgctcggcatggat
atactgtgtcaggccaagtccggcatgggtaagaccgcggtgtttgtgctggcaacgcta
cagcagctggaacccacggagaatgtgccatatgtattggtcatgtgtcacacacgtgag
ctggccttccagatcggcaaagagtacgaacgtttcgccaagtatatgacgaatgtgaag
gtcgctgtctatttcggtggcttggccatacaaaatgatgagaaatcgctaaaagaaacc
atgccacacatcatcgtcggcacacccggtcgcatactggctttgatacgcaacaagaaa
ctgaatctgaagaatctgaaacacttcgtgctcgacgaatgcgatcagatgttggagcat
attgatatgcgtcgcgatgtgcaggagatcttccgcggcacgccacacgctaagcaagtg
atgatgttctccgccacgctatgtaaagaaatacgtccagtatgcaagaaatttatgcaa
gatcccatggaggtctatgttgatgacgaggctaagctgacgctacacggcttgcaacaa
cactacgtgcagctgaaggagaacgagaagaataagaaactattcgagctgttagatgtg
cttgaattcaatcaggttgtcatctttgtgaaatcggtgcaacgttgcattgcgctcagt
caactgctgaccgaacagaactttcctgcggtcggcatacatcgtggcatgacacaggag
gagcgtttaaaacgttatcaggagttcaaagatttccaaaagcgtattttggtcgccacc
aatctctttggacgcggcatggatatcgaacgtgtgaacatcgccttcaactatgacatg
ccggagagcagtgacacctatttgcatcgtgtggcacgcgctggtcgcttcggcaccaaa
ggtttggccatctccttcgtttcggatgaggcggataacaaaattttgagtgaagttcag
tcaagatttgatgtgcagatcacagagttgccagatcaaattgaattgtcctcgtatatt
gagggtcgctaa
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