Bactrocera oleae (olive fruit fly): 106623012
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Entry
106623012 CDS
T07646
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03013
Nucleocytoplasmic transport
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106623012
09122 Translation
03013 Nucleocytoplasmic transport
106623012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106623012
03041 Spliceosome [BR:
bod03041
]
106623012
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106623012
Spliceosome [BR:
bod03041
]
Complex C
Other components
EJC/TREX
106623012
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106623012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
eIF2A
Beta-prop_HPS5
Beta-prop_EML
RMC1_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
PD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_ELP1_1st
Beta-prop_DCAF12
B-prop_COPA_B_2nd
Peptidase_S9_N
DPPIV_N
Beta-prop_Nup120_160
baeRF_family5
Motif
Other DBs
NCBI-GeneID:
106623012
NCBI-ProteinID:
XP_014097836
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MGQSNMSLEDLRAYFKTHGKIREQKAHTSKVHSVGWSCDGRRLASGSFDKTVAVYTLERD
RVSKENTYRGHTGSVDQLCWHATNADLLSTASGDKTVRIWDIRAGKCSTVTNTKGENINI
TWSPDGKTIAVGNKEDLVTFIDTRTNKIRAEEQFNFEVNEIAWNNTSDLFFLTNGMGCVH
ILSYPSLELQHVLKAHPATCICIEFDPTGKYFATGSADALVSLWDANELACLRVLSRLDW
PVRTISFSHDGKLLASASEDLLIDIAHTETGEKVADVSVDAATFTVAWHPKQYLLAYACD
DKDGNDRRREAGNLKVFGFSE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggacaatccaatatgtctttagaagacttgagagcttacttcaaaacacatggtaaa
attcgagagcaaaaagcgcacacatcgaaggtacattctgtgggctggagttgtgatggc
agacgtttggcttctggttcctttgacaaaactgtagctgtttatacgctagaacgcgat
cgtgtgagtaaagagaatacctaccgtggccataccggttcggtggaccagctttgctgg
catgcaacaaacgcagacctgctcagcacggctagtggtgataagactgtacgtatttgg
gacatacgcgctggcaagtgctccaccgttacgaatacaaaaggtgaaaatataaatatc
acatggtcacctgatggcaaaactatagcagttggtaataaagaagacttggtgacattc
attgatacgcgcacaaataaaatacgggctgaagagcagtttaactttgaggtgaatgaa
attgcatggaataatacaagtgatctgtttttcttgacaaacggcatgggttgtgtgcac
atcttaagctatcctagtctagaattgcagcacgtgctgaaggcccatcctgctacttgc
atatgtattgaatttgatcccactggtaaatattttgctaccggttcagcagacgcgctc
gtctcactttgggatgcaaacgagttagcctgtttgcgcgtgctatcacgcctagattgg
ccggtacgtacgatatcctttagtcacgacggtaaacttttggcatcggctagcgaggat
ttgcttatcgatattgcgcatacggagacaggcgaaaaagtggctgatgtcagtgtcgat
gcggcaacttttacagtagcatggcatcccaagcaatatttactcgcttacgcgtgtgat
gataaagatggtaacgaccgaagacgtgaagcgggtaaccttaaagtttttgggttttcg
gagtaa
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integrated database retrieval system