KEGG   Bactrocera oleae (olive fruit fly): 106623012
Entry
106623012         CDS       T07646                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bod  Bactrocera oleae (olive fruit fly)
Pathway
bod03013  Nucleocytoplasmic transport
bod03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bod00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106623012
  09122 Translation
   03013 Nucleocytoplasmic transport
    106623012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bod03019]
    106623012
   03041 Spliceosome [BR:bod03041]
    106623012
Messenger RNA biogenesis [BR:bod03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106623012
Spliceosome [BR:bod03041]
 Complex C
  Other components
   EJC/TREX
    106623012
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106623012
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 eIF2A Beta-prop_HPS5 Beta-prop_EML RMC1_N WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N PD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_ELP1_1st Beta-prop_DCAF12 B-prop_COPA_B_2nd Peptidase_S9_N DPPIV_N Beta-prop_Nup120_160 baeRF_family5
Other DBs
NCBI-GeneID: 106623012
NCBI-ProteinID: XP_014097836
LinkDB
Position
Unknown
AA seq 321 aa
MGQSNMSLEDLRAYFKTHGKIREQKAHTSKVHSVGWSCDGRRLASGSFDKTVAVYTLERD
RVSKENTYRGHTGSVDQLCWHATNADLLSTASGDKTVRIWDIRAGKCSTVTNTKGENINI
TWSPDGKTIAVGNKEDLVTFIDTRTNKIRAEEQFNFEVNEIAWNNTSDLFFLTNGMGCVH
ILSYPSLELQHVLKAHPATCICIEFDPTGKYFATGSADALVSLWDANELACLRVLSRLDW
PVRTISFSHDGKLLASASEDLLIDIAHTETGEKVADVSVDAATFTVAWHPKQYLLAYACD
DKDGNDRRREAGNLKVFGFSE
NT seq 966 nt   +upstreamnt  +downstreamnt
atgggacaatccaatatgtctttagaagacttgagagcttacttcaaaacacatggtaaa
attcgagagcaaaaagcgcacacatcgaaggtacattctgtgggctggagttgtgatggc
agacgtttggcttctggttcctttgacaaaactgtagctgtttatacgctagaacgcgat
cgtgtgagtaaagagaatacctaccgtggccataccggttcggtggaccagctttgctgg
catgcaacaaacgcagacctgctcagcacggctagtggtgataagactgtacgtatttgg
gacatacgcgctggcaagtgctccaccgttacgaatacaaaaggtgaaaatataaatatc
acatggtcacctgatggcaaaactatagcagttggtaataaagaagacttggtgacattc
attgatacgcgcacaaataaaatacgggctgaagagcagtttaactttgaggtgaatgaa
attgcatggaataatacaagtgatctgtttttcttgacaaacggcatgggttgtgtgcac
atcttaagctatcctagtctagaattgcagcacgtgctgaaggcccatcctgctacttgc
atatgtattgaatttgatcccactggtaaatattttgctaccggttcagcagacgcgctc
gtctcactttgggatgcaaacgagttagcctgtttgcgcgtgctatcacgcctagattgg
ccggtacgtacgatatcctttagtcacgacggtaaacttttggcatcggctagcgaggat
ttgcttatcgatattgcgcatacggagacaggcgaaaaagtggctgatgtcagtgtcgat
gcggcaacttttacagtagcatggcatcccaagcaatatttactcgcttacgcgtgtgat
gataaagatggtaacgaccgaagacgtgaagcgggtaaccttaaagtttttgggttttcg
gagtaa

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