Bactrocera oleae (olive fruit fly): 106623285
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Entry
106623285 CDS
T07646
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106623285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bod03041
]
106623285
03009 Ribosome biogenesis [BR:
bod03009
]
106623285
Enzymes [BR:
bod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106623285
Spliceosome [BR:
bod03041
]
Complex A
U2 snRNP components
U2 related factors
106623285
Complex B
106623285
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106623285
Ribosome biogenesis [BR:
bod03009
]
Eukaryotic type
90S particles
Helicases
106623285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
ABC_tran
ResIII
AAA_25
AAA_30
ATPase
T2SSE
TsaE
PhoH
AAA_7
AAA_23
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
106623285
NCBI-ProteinID:
XP_014098212
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSKRRIEVGETYNSKTKKDYDPSPTAFSNASAVAPVTGTVVGATRQPGTINPYNMKPFTQ
RYFNLYKKRITLPVFEYQADFMRLLNEHQCIVLVGETGSGKTTQIPQWCVEFALTKGKKG
VACTQPRRVAAMSVAQRVSEEMDVGLGEEVGYSIRFEDCSSAKTVLKYMTDGMLLREAMS
DPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFDNA
PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQEEIEEACK
RIKRETDNLGSDIGELKCIPLYSTLPPNLQQRIFEPAPPRNANGAIGRKVVVSTNIAETS
LTIDGVVFVIDPGFAKQKVYNPRIRVESLLISAISKASAQQRAGRAGRTRPGKCFRLYTE
KAYKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA
ALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAK
KAADEAKMRFAHIDGDHLTLLNVYHAFKQSGEDPNWSYENFINFRSLKSADNVRQQLARI
MDRFNLKRSSTDFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTCL
DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLTLAPQYYEMTNFPQCEAKRQLEMLQQRI
ESKQYQKGF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggcgcatagaagtcggtgaaacttataattcgaagacgaaaaaggattat
gatccgtccccgacagcgtttagtaatgcctctgcagttgctcccgtgaccggtaccgta
gttggtgccacgcgccagcctggcactataaatccgtacaacatgaagccctttacacaa
cgctattttaatctttacaaaaaacgaattacgctgccagtttttgaatatcaagctgac
ttcatgcgtctattaaacgaacatcaatgcatagttttagtgggcgaaactggttctggt
aaaactacacaaatcccacagtggtgcgttgaatttgctctgacaaaaggtaaaaaaggt
gtcgcttgtacacaaccacgtcgtgtggcagcaatgtctgtggcacagcgtgtttcggaa
gaaatggacgtaggacttggcgaagaagtgggatattccattcgttttgaggattgctca
tctgccaaaaccgtactaaaatacatgacagacggtatgttgttgcgtgaagctatgtcg
gatcccatgttggaacaatatcaggttatattgttggatgaggctcacgaacgtacattg
gcaacagatattttaatgggtgtattgaaggaagttataaggcaacgaaatgatttgaaa
ttagtagtaatgtccgccacattagatgcaggcaaatttcaacaatatttcgacaatgca
cctttaatgaacgtaccgggtcgtacacatccggtagaaattttctacacacccgaaccc
gaacgcgattacttagaagcagcaatacgtacagtaatacaaatacatatgtgtgaagat
atcgaaggtgatatattgatgtttttaactggtcaagaagaaatcgaagaagcatgtaag
cgtattaaacgtgaaaccgacaatttgggttcagatattggtgaacttaaatgcatacca
ctatactccactttgccgccaaatttacaacaacgtatttttgagccggcaccaccccgc
aatgctaacggggccatcggacgtaaagttgttgtatccaccaacattgctgagacatcg
ctcaccattgatggtgttgttttcgtgattgatccaggctttgcgaaacaaaaagtttac
aatccacgtatacgtgtagagagtttacttatttccgctatttctaaagcttcggcccaa
caacgtgctggtcgtgctggacgaacacgcccaggaaaatgcttccgattatacactgaa
aaggcttataaaaatgaaatgcaggataatacctaccctgaaatattgcgttcaaattta
ggtactgtcgttttacaattgaagaagcttggtattgatgatttggtgcacttcgatttc
atggatccacctgcaccagaaacacttatgcgtgctctggaattgcttaattacttagct
gctttggatgatgatggtaatcttaccgatttgggtgccgtcatgtctgaatttccattg
gatccacagttggcaaaaatgttaatagccagctgtcaacataattgctcgaatgagata
ctatcgataacggcaatgctgtcggtgccacaatgctttgtgcgacccaatgaggctaag
aaggctgcagatgaggcaaagatgcgtttcgctcatatcgatggtgatcacttgacatta
ttaaatgtttaccatgcttttaaacagagtggtgaagaccccaattggtcttatgagaat
tttataaatttccgttcattgaaatcagccgataatgtgcgtcaacaactcgcacgtata
atggatcgtttcaatttgaaacgtagcagcaccgactttacatccaaagactattatgtt
aatatacgcaaagctttagtgcaaggctttttcatgcaggtcgctcatttggagcgtacc
ggtcactatttgaccataaaagacaatcaaaatgtgcagttgcatccgtctacatgttta
gatcataaacccgattgggtaatctataatgaattcgtattgacgacgaagaattacata
cgcaccgttacagatattaaaccggaatggctacttactttagcaccacagtactacgaa
atgacaaactttccacaatgcgaagcaaaaagacaactggaaatgctgcagcagcgaatc
gaatcaaagcagtatcaaaagggattttaa
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integrated database retrieval system
