Bactrocera oleae (olive fruit fly): 106627951
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Entry
106627951 CDS
T07646
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106627951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bod03041
]
106627951
Spliceosome [BR:
bod03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106627951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
PRP4
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_like
Beta-prop_SPT8
Nha1_C
Motif
Other DBs
NCBI-GeneID:
106627951
NCBI-ProteinID:
XP_014103765
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSDDEDIQYVKRQRTLHYGSLEEVERKRQTAAVAGASSTVTAATSSGVVTNQLEDIESDE
DYEEVKKPTAPTLPPTSGALANKIDDDYFDLETEVAKDKEALLKEFERKKRARQINVSTD
DAEIKANLRQLNEPICYFGEGPAERRRRLKELLASLGENAIKQKQTEEEERKQLQKEQET
TWYHEGPEALRVARIWIADYSLPRAKTRLEHARSLLDVPSATRAGRLVELQKRLHALAPQ
CSQVGDTRPVSGVAFSEDSKLIMTSSWSGLCKVWTVPDCKLLLTLRGHASYVGGVAFRPG
VTQDDKNIVAMASGGHDGAVKLWGFNSEESLADITGHMPHRVSKLGFHPSGRFLATACYD
SSWRLWDLEQKTEVLHQEGHAKAVHSLSFQIDGSVIVTGGIDAFGRVWDLRTGRCVMFLE
GHLGSIFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQRDGGSF
LVTSSYDCTTKIWSNKTWQPLKTLLGHDGKIMAVDISPDSQHIVTASFDRTFKVWASES
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgatgaggacattcagtatgttaaaaggcaacgcacactgcactacggttct
ctggaagaagtagagagaaagcgccagacagctgctgttgcgggggcaagctccacagta
actgctgccacttcaagtggtgttgttaccaatcaactcgaagatatcgaatctgatgaa
gattatgaggaggtgaagaaaccaacggcgcctacgttaccaccgacttctggtgcttta
gctaataagatcgatgatgactatttcgacttggaaacagaagtagcgaaagacaaggaa
gcgctgctaaaagaatttgaacgcaaaaaacgtgcacgtcaaataaacgtttcaactgat
gacgccgaaataaaagctaatttgcgacagctaaatgagccgatatgctactttggggag
ggtccagcagaaaggcggcgccgtttaaaagagttgttagctagcttaggggagaatgcg
attaagcaaaagcaaaccgaagaggaagagcgaaagcaacttcagaaagaacaagaaaca
acatggtatcacgaaggaccggaagctttacgggtggcaagaatatggattgcagattac
tccttgccaagagctaaaactcgcctggaacatgcgcgttctctattagatgtgccaagt
gcgacacgtgcaggccgattagtagagctgcaaaagcgtttacatgcattagcgccgcaa
tgcagtcaagtgggagatacgcgtccagtaagtggtgtagcatttagcgaagactctaaa
ttgattatgacatcatcatggtccggattgtgcaaagtgtggacagtaccagattgtaag
cttctattaacacttcgcggacatgcaagttatgttggtggtgtagcattccggccaggc
gtgacgcaagatgataaaaatattgtagcaatggcttctggcggtcatgatggagcagtg
aagttatggggctttaattcggaagaatctttagcagacataaccgggcatatgccacat
agagtttctaaattagggtttcatccatccggccgttttctggcaacagcttgttatgat
tcctcctggcgcctatgggatttggaacaaaaaaccgaagttttgcatcaagaagggcat
gccaaagcagttcatagtcttagctttcaaatagatggcagtgtcatagtaacaggtgga
attgacgcattcggacgtgtatgggatctaagaacaggccgttgcgtaatgtttctcgaa
ggtcatcttggttctatttttggcgttgatttctcgccaaatggatttcatattgctact
ggctcacaggacaatacttgcaaaatttgggatttacgccgtcgacagccagtttatacg
attcctgcacatacgaaccttatatcagatgttaaataccaacgagatggtggtagtttt
ttggttacatcctcttatgattgcaccacgaaaatttggtcgaataaaacttggcagcca
ttaaaaactttattgggacatgatggcaaaataatggccgtggacatctcacccgactcg
caacatattgtaacggcgtcgttcgatcgtaccttcaaggtgtgggcgtccgagagctga
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