Brassica oleracea (wild cabbage): 106292165
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Entry
106292165 CDS
T04124
Name
(RefSeq) tRNA (cytosine(34)-C(5))-methyltransferase
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106292165
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
106292165
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106292165
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
DUF2621
Methyltr_RsmF_N
Motif
Other DBs
NCBI-GeneID:
106292165
NCBI-ProteinID:
XP_013614782
UniProt:
A0A0D3A128
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Position
C1:complement(517016..520523)
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AA seq
736 aa
AA seq
DB search
MGRGRRHRGRSHRNQSEESRENAPKPLKSDAPFDSTIQNRTWSNLDFEEYYKEQRIVKAE
EWDSFIEILRKPLPAAFRVNSNGQFCDEILSMLENDFVKSLQAEAVESGEVEAIKPLPWY
PNNLAWHSNFSRKEIRKNQTLERFHEFLKLETEVGNMTRQEAVSMVPPLFLDVHPDHFVL
DMCAAPGSKTFQLLEIIHESAEPGSLPNGMVVANDVDYKRSNLLIHQTKRTCTTNLIVTN
NEGQHFPNCNSIASEKCHHPIDQLLFDRVLCDVPCSGDGTLRKAPDIWRRWNSGSGNGLH
SLQVVIAMRGLSLLKVGGRMVYSTCSMNPIEDEAVVAQILRRCGGSVELVDVSDKLPELI
RRPGLKKWKVHDRGGWYRSYKDVPKVQRDGVLRSMFPSGKSDKDSTTGEIASDESAEEVC
NLPLERCVRIVPHDQNTGGFFIAVLHKVSSLPDFQEKRRYTRGRNSSEKTSYEEVSDTVI
TTQPEENKEEIVVEEEAASDNGLKLEKETTSKEGTVELGKEVPPPVKGKWKGLDPVVFLR
DETVIDGIKRFYGINDESFPLNGHLVTRNSDTSTKGNVKRIYYVSRSVKDVLELNLAVGE
KIKVASVGLKMFEKQSARECEAGSCSFRITSEGLHVILPYMTKQLLYATMVDFKNLLQYK
SIKFTDFVHPQFGQKAAEVAEGYCVVILVDGAQKDGSEAVKVNSSTIAIGCWKGKASLTV
MVTTVDCDQLIQKLAC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagacgacacagaggccgttctcacagaaaccaatcagaagagagcaga
gaaaacgctccaaaacctctcaagtccgatgctcccttcgattccaccatccagaatcgc
acctggtcgaatctcgatttcgaggagtattacaaggagcaaaggatagtgaaagcagag
gagtgggattcattcattgagattcttcgtaagccattgcctgctgccttcagagtcaac
tccaatggccagttttgcgatgagattttatcgatgttggagaatgacttcgtgaagtct
cttcaggctgaggctgtggagagtggtgaagtggaggcgatcaagcccttgccttggtac
cctaacaatcttgcttggcattctaatttctctcgcaaggagattagaaaaaaccagact
cttgaaaggtttcatgagtttttgaagttggaaactgaagttgggaacatgaccaggcaa
gaagctgttagcatggtacctcctctcttccttgatgtgcatccagatcattttgtactc
gacatgtgtgctgcacctggctccaagacatttcagcttcttgagataattcatgaatca
gcagaaccaggatctctacctaatggaatggtggtggcgaatgatgtggattacaaaaga
tctaaccttcttattcaccaaactaagagaacgtgtacaaccaacttgatagtcaccaac
aatgaaggtcaacatttcccaaactgcaactcgatagcatctgagaagtgtcatcatccc
attgatcagcttctgtttgatcgtgtcttatgcgatgtaccctgtagtggtgatggcact
ctgcgcaaggctccagacatatggcgaagatggaactctggatcagggaatggacttcat
agtctacaagttgtgattgccatgagaggtttgtctctgctaaaagttggtgggagaatg
gtatactcaacctgctcaatgaacccaattgaagatgaagctgttgttgctcaaattctg
aggagatgtggaggctctgttgagcttgtagatgtctcagataagcttcctgaacttatc
cgaagaccaggtcttaagaaatggaaggtgcatgatagaggtggctggtatagatcttac
aaagatgttccaaaagtgcagagagacggagttcttagaagcatgttcccttctggtaaa
agcgataaagactcaacaacaggagaaatagcttctgatgaatcagctgaggaagtctgt
aatcttcctcttgaacgttgtgtgaggatagtgcctcatgatcagaacactggggggttc
tttatcgcagtgcttcacaaagtttcatctctaccagattttcaggagaagagaaggtat
accagaggcagaaactcatctgagaaaacttcatatgaagaagtctctgacactgtgatt
actactcagcctgaagagaataaagaggagatagttgtagaagaagaagcagcttcagac
aatggcttgaagcttgagaaggaaaccaccagcaaagaaggcactgtagaattgggtaaa
gaagtgccaccaccagtgaaagggaagtggaaaggacttgaccctgttgttttcttgaga
gatgaaacagtgatcgacgggatcaagagattctacggcatcaacgatgagtcttttcct
ctcaacggccatctcgtgactagaaacagcgacacgagcaccaaaggcaacgtgaagagg
atttactatgtttcaagatcggttaaggatgttctcgagcttaaccttgcggtaggggag
aagattaaggtcgcatctgttggcctcaagatgtttgagaaacaatcagcgagagaatgt
gaagctggctcttgctcattccggataacatcagagggattgcatgtgatccttccctac
atgaccaagcagttactttacgcaacaatggtggatttcaagaatctcctgcaatacaaa
tctatcaagttcacagattttgttcatccacagtttggccagaaagcagcagaagtagcc
gagggatactgcgttgttattcttgttgatggtgctcagaaggacgggtctgaagcagtc
aaagtgaattcatcaacaatagccattggatgctggaaggggaaagcgagcttaacagtt
atggtaacaacagtggactgcgaccaacttatccagaaacttgcttgctga
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