Brassica oleracea (wild cabbage): 106292286
Help
Entry
106292286 CDS
T04124
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106292286
Enzymes [BR:
boe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
106292286
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
106292286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
106292286
NCBI-ProteinID:
XP_013583365
LinkDB
All DBs
Position
C1:1692382..1695223
Genome browser
AA seq
583 aa
AA seq
DB search
MKVVTYNVNGLKQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTSDLTIADGYESFFS
CTRTCEKGRTGYSGVATFCRVKSASSSCEAALPVAAEEGFTGLVNSGFSRGGKSDSSVVA
EGLEECEREELLRVDQEGRCVMTDHGHFVVFNVYGPRAVADDAERVEFKHRFYDVLERRW
ECLLRRGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKH
PERTDAFTCWSSSSGAEQFNYGSRIDHILVSGPCFHGGDRDQEGHSFLACHVKECDILTE
YKRFKNENMPTRWKGGLGIKLKGSDHVPVFTSFDDLPDIPQHSTPPLASRYLPMIFGFQQ
TLASVLMKRQANEQAKSIEVSCSSLSQSSTTPGCGEISIGPLRNCSMVGISHEDSCSLEK
ESTKRVNTTSGGSSDGNKKKMRRIQSSQQLSLKSFFTSKSAASYASSSQSSSQVESIAEP
TVSSKGDDELTATSSQELDQSGSPAKQKNDAALMEWQRIQNLMQNSIPLCKGHKEACVAR
VVKKPGPTFGRRFYVCSRAEGPSSNPEANCGYFKWASSKFRDK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagtgacttacaacgtcaatggccttaagcaacgagtttcccagttcgattcc
ctcctcaaactcctcgattccttcgacgccgacatcatctgcttccaggaaacgaagctc
aggaggcaagaactaacatcggatctaacgatagccgatggttacgaatcgttcttctcg
tgcactcgcacgtgcgagaaaggtcgtaccggttactccggtgtagcgacgttctgcagg
gtgaagtcagcgtcttcaagctgtgaagctgctttgcctgttgctgctgaagaaggcttc
actggtcttgttaacagtggcttctcgagaggtgggaagagtgatagttctgttgtagct
gaaggtcttgaggagtgtgagagagaagagcttcttagggttgatcaagaggggcgttgc
gttatgactgatcacggacattttgttgtttttaatgtttatggaccaagagctgtagct
gatgatgctgagagggtcgagtttaagcatcggttctatgatgttttagagagaaggtgg
gagtgtcttctgcgtcgaggaagaagggtatttgttgttggggatctcaacattgctcct
tttgctatggatcggtgtgaagctggccctgacttcgagaaaaacgagttcagaaaatgg
tttagatctctgctagttgaacgtggaggctccttctctgacgttttcagatctaaacat
cctgaaaggacagatgcattcacatgttggtcttctagtagtggagctgaacaatttaac
tacggttccagaatcgatcatatcttagtttctggaccatgcttccatggaggagatcga
gatcaggaaggccatagttttttagcttgccatgtcaaggaatgcgacatattaacagaa
tataagcggtttaagaatgaaaacatgccaacaaggtggaaaggtggattgggtataaaa
ctcaagggatcagaccatgttcctgtcttcacaagttttgatgatttgcctgacatcccc
caacacagcacacctcctttagcttcaagatatcttcccatgattttcggtttccagcaa
actcttgcgtcagtgttaatgaaaaggcaagctaatgagcaagccaagtccattgaggtt
tcatgttcatcattgagtcaaagtagcactacaccaggttgtggagagatctcaatagga
ccactcagaaactgcagtatggtgggtatttcacatgaggactcttgttctttagagaaa
gaatccactaagagggtgaacacaacatctggaggctcgagtgatggaaacaagaagaaa
atgaggaggatccaatcttctcagcagctttctttaaagtcctttttcacttccaaatct
gctgcttcatatgcttcctcaagtcagagctcctcccaagtcgagagcatcgcagaaccg
actgtttccagcaaaggagacgatgagttgactgctacttcatcacaggaactagatcaa
agcggttctcctgctaaacaaaagaacgatgcagcattaatggagtggcagagaatacag
aacctaatgcaaaacagcatacctctatgcaaaggacacaaagaagcttgtgtcgctcga
gttgtaaagaaaccaggtcccacttttggacgcagattctacgtctgctctcgagctgag
gggccttcctctaatccagaagcaaactgtggttatttcaaatgggcttcatccaaattc
agagacaagtag
DBGET
integrated database retrieval system
