Brassica oleracea (wild cabbage): 106292421
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Entry
106292421 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106292421
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106292421
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106292421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-HC5HC2H
FANCL_C
Tmpp129
zf-Nse
Sas6_CC
Adeno_E3_CR2
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106292421
NCBI-ProteinID:
XP_013583465
UniProt:
A0A0D3A3M9
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All DBs
Position
C1:5758636..5760075
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AA seq
419 aa
AA seq
DB search
MYQIFIFFVTIFHSYYYVSAQPPAPPFRNGDLVTNFEPSLAVVTGVLAIMFTLTFVLLVY
AKCCHIDLRSGTGDGRRQDRRLRQGIFFNRSTNSSDRFSGLDKTAIESLPLFRFSALKGS
KQGLECSVCLSKFESVEILRLLPKCRHAFHVGCIDQWLEQHATCPLCRARVSVEDESSVY
GNSFRFLNQSEVREDSSLELYIEREEEEEEEERRQREELGGSSRFSIGGSFRKILKLGHK
DKPLLDQHGEDKLMHKFNHRILVSDVVFKNRWSNVSSSDLMFLNSEMVSSISSERFSSMD
RVKRGDEEDHRGNLQVKEDNRMLENKLSENRDLGSKSRNVMIEPGRRSISDITAVPRLSI
VVHGDCSGSNAASALENGGNETEERRRRLWLPIARKTAQWFANREKRHQINTTHQHFDV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaatcttcatcttctttgtaacaatcttccacagttattactatgtatctgct
cagcctcctgctcctccgttcagaaacggcgacctagtcacaaacttcgagccgagttta
gccgtcgtcaccggcgttctcgccatcatgttcacactcactttcgtcctcctcgtctac
gctaagtgctgccacatcgatctccggtcaggtaccggcgacggaagacggcaagatcgc
cggctccgacaaggaatattctttaaccggtctaccaactcctcggaccgattctccggt
ttagacaaaaccgcgatagagtcacttcctctgtttagattctctgctttgaaaggatca
aaacaagggcttgagtgttctgtctgtctatctaaattcgaaagcgtcgagattcttaga
ttgttgcctaaatgtcgtcacgctttccacgtgggatgcatcgatcagtggcttgagcag
cacgcaacttgtcctctctgcagagcgagagtctcagtggaagatgagtcctctgtttat
ggtaacagcttccggttcttgaatcagtctgaggtacgagaagactcgagcttggagctt
tacatcgagagagaagaagaagaagaagaagaagagaggagacagagagaggaacttggt
gggtcgtcgaggttcagcatcggagggagtttcaggaagattcttaaattaggtcataaa
gataaaccgttacttgatcaacacggagaagataagttgatgcataagttcaatcatagg
atccttgtgtctgatgttgtgttcaagaatcgttggagcaacgtgagctcgtctgatttg
atgtttttgaattcggagatggttagttcgatttccagtgagagattctcgtcgatggat
agagtgaagagaggtgatgaagaggatcacagaggtaacttgcaagtcaaggaagataat
agaatgttggagaacaaattgtcggaaaacagagatcttggttctaaatcaagaaacgtt
atgatcgagccgggaagaagatcgatttctgacatcactgcggttcctagactgagtatt
gtggtccatggagattgtagcggttcaaacgcagcgtctgcgttagaaaacggtggaaac
gagacggaggagagaagacggcgtttgtggctgcccatcgctagaaaaaccgctcagtgg
tttgccaatagagaaaaaagacatcaaattaacacaacacaccaacactttgatgtttag
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