Brassica oleracea (wild cabbage): 106292528
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Entry
106292528 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106292528
04120 Ubiquitin mediated proteolysis
106292528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106292528
04131 Membrane trafficking [BR:
boe04131
]
106292528
04121 Ubiquitin system [BR:
boe04121
]
106292528
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106292528
Chaperones and folding catalysts [BR:
boe03110
]
Other chaperones and cochaperones
Others
106292528
Membrane trafficking [BR:
boe04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106292528
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
U-box type E3
106292528
Multi subunit type E3
STUB1-CHIC2 complex
106292528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_16
TPR_8
TPR_11
zf-NOSIP
TPR_17
zf-Nse
Motif
Other DBs
NCBI-GeneID:
106292528
NCBI-ProteinID:
XP_013583586
LinkDB
All DBs
Position
C5:43907188..43909222
Genome browser
AA seq
311 aa
AA seq
DB search
MATGAVSPMAAKQAERLKEDGNNCFKKERFGAAIDAYTEAITLSPKVPVYWTNRALCHMK
RKDWTRVEEDCRKAIQLDHDSVKVLIFFFFFFFFCSWLSLLLGLLHLCSMWQAHYMLGLA
LLQKEEYADGVKALQRALDFGRGANPTGYMVEEIWEELSKAKYMEWELLSAGRSWELNSL
KETCVAALNQQRALDMSRTEESSEEDYSSHTDQLKALDRVFEKAAEEDKPTEVPDYLCCN
ITLEIFRDPVISPSGVTYERAAILEHINKVGKFDPITREELDPSKLVSNLAIKEAVAAYL
EKHVWAYKTGC
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggcgcggtctcccccatggcggcgaaacaagccgagcggttaaaggaagac
ggcaacaactgcttcaagaaagaacgcttcggcgccgccatcgatgcttacacagaggcg
ataacgttgtcaccgaaggttcctgtttactggactaatcgagctctctgccacatgaag
cgaaaggattggactagggttgaagaggattgtcgcaaagctattcagcttgaccacgat
tctgttaaggttttgatttttttttttttttttttttttttttgttcttggctctccctc
ttattaggattgttacatttgtgttctatgtggcaggcacactacatgctaggtcttgcg
ttattgcagaaggaagaatatgctgatggagtcaaggcgttgcaaagggctttggatttt
ggaagaggcgcaaatccaacaggatatatggttgaagaaatatgggaagagctttctaaa
gcaaaatacatggagtgggaactgctttccgcggggcgctcgtgggaattgaatagtttg
aaggaaacttgcgtggctgctcttaatcagcaacgtgctttagatatgtctcgaacagaa
gagtcctcggaagaagactactcttcccatactgatcagttgaaagctcttgatcgagtt
tttgagaaagctgctgaagaagacaaaccaactgaggttccagattacttgtgttgcaac
attactcttgagatattccgagatcctgtgatttctccaagtggggttacatatgaaaga
gcagcaatccttgaacatattaacaaggtgggaaagtttgatcctataacgcgtgaggaa
ctcgacccatccaaactcgtttcaaatctggctatcaaagaggcagtggctgcgtatcta
gagaagcacgtctgggcttacaaaacgggttgttga
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