KEGG   Brassica oleracea (wild cabbage): 106292540
Entry
106292540         CDS       T04124                                 
Name
(RefSeq) THO complex subunit 7B
  KO
K13176  THO complex subunit 7
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03013  Nucleocytoplasmic transport
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106292540
  09122 Translation
   03013 Nucleocytoplasmic transport
    106292540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106292540
   03041 Spliceosome [BR:boe03041]
    106292540
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106292540
Spliceosome [BR:boe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106292540
SSDB
Motif
Pfam: THOC7 DUF1818 PUMA_CC DUF7795
Other DBs
NCBI-GeneID: 106292540
NCBI-ProteinID: XP_013583603
UniProt: A0A0D3CN55
LinkDB
Position
C5:46268344..46269506
AA seq 236 aa
MSVKARRISGRLETVVAKPTYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV
LEVDKEEDNYAECNRLAKAFLQELTTFEIPLLKSQAVVEANVREKESFDEVKVETERQIM
QAKGEIEELKKQLEESKIERQHKEECETIRKLISAQPPRAETEKVIAELKREIAELEAES
TASWRLLELRKKQFALLLHVVDELQNTMEDEQKSLVDEIRTAVEDQRNTTEPMSVD
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcagtgaaagcaaggaggatctccgggagattagagactgtagtagccaaacctact
tacgccttcgaccccgtcgacgatgacaagatcataagaaaccgtctcctcacccgaacc
accaccacacgaggcgagcctcccttaaagaagctccagaagaagttcacttccttcgtc
ctcgaagtcgacaaagaggaagacaactacgccgagtgcaaccgcctcgcgaaggccttc
ttgcaggagctaaccaccttcgagatccctcttctcaagagccaggcggtcgtggaagct
aacgttagggagaaagagagcttcgacgaggtgaaggttgagaccgagaggcagatcatg
caggcgaaaggtgagatcgaggagctgaagaagcagcttgaggagagtaagattgagagg
cagcataaggaagagtgcgagacgattaggaagttgatctccgcgcagccgccgagggcg
gagactgagaaggtgattgctgagttgaagagggagattgctgagcttgaagcggagagc
actgcgagctggaggttgcttgagctgaggaagaagcagtttgctctcttgttgcatgtg
gtggatgagttgcagaacacaatggaagatgagcagaagagtctagtggatgagattcgg
acagccgtggaagatcagaggaacacaaccgagcccatgtctgtggattaa

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