Brassica oleracea (wild cabbage): 106292540
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Entry
106292540 CDS
T04124
Name
(RefSeq) THO complex subunit 7B
KO
K13176
THO complex subunit 7
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106292540
09122 Translation
03013 Nucleocytoplasmic transport
106292540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106292540
03041 Spliceosome [BR:
boe03041
]
106292540
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106292540
Spliceosome [BR:
boe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106292540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
DUF1818
PUMA_CC
DUF7795
Motif
Other DBs
NCBI-GeneID:
106292540
NCBI-ProteinID:
XP_013583603
UniProt:
A0A0D3CN55
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Position
C5:46268344..46269506
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AA seq
236 aa
AA seq
DB search
MSVKARRISGRLETVVAKPTYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV
LEVDKEEDNYAECNRLAKAFLQELTTFEIPLLKSQAVVEANVREKESFDEVKVETERQIM
QAKGEIEELKKQLEESKIERQHKEECETIRKLISAQPPRAETEKVIAELKREIAELEAES
TASWRLLELRKKQFALLLHVVDELQNTMEDEQKSLVDEIRTAVEDQRNTTEPMSVD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaaagcaaggaggatctccgggagattagagactgtagtagccaaacctact
tacgccttcgaccccgtcgacgatgacaagatcataagaaaccgtctcctcacccgaacc
accaccacacgaggcgagcctcccttaaagaagctccagaagaagttcacttccttcgtc
ctcgaagtcgacaaagaggaagacaactacgccgagtgcaaccgcctcgcgaaggccttc
ttgcaggagctaaccaccttcgagatccctcttctcaagagccaggcggtcgtggaagct
aacgttagggagaaagagagcttcgacgaggtgaaggttgagaccgagaggcagatcatg
caggcgaaaggtgagatcgaggagctgaagaagcagcttgaggagagtaagattgagagg
cagcataaggaagagtgcgagacgattaggaagttgatctccgcgcagccgccgagggcg
gagactgagaaggtgattgctgagttgaagagggagattgctgagcttgaagcggagagc
actgcgagctggaggttgcttgagctgaggaagaagcagtttgctctcttgttgcatgtg
gtggatgagttgcagaacacaatggaagatgagcagaagagtctagtggatgagattcgg
acagccgtggaagatcagaggaacacaaccgagcccatgtctgtggattaa
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integrated database retrieval system